RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 BLOC1S2Q6QNY1 142 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 INCENPQ9NQS7 918 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 CDKL5O76039 1030 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 ANKRD18AQ8IVF6 992 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
RNF43-201ENST00000407977 PSME1Q06323 249 aa15.3■□□□□ 0.04
RNF43-201ENST00000407977 SYCP1Q15431 976 aa15.3■□□□□ 0.04
RNF43-201ENST00000407977 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
RNF43-201ENST00000407977 CALCOCO1Q9P1Z2 691 aa15.3■□□□□ 0.04
RNF43-201ENST00000407977 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
RNF43-201ENST00000407977 DNAJC2Q99543 621 aaKnown RBP15.29■□□□□ 0.04
RNF43-201ENST00000407977 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
RNF43-201ENST00000407977 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
RNF43-201ENST00000407977 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
RNF43-201ENST00000407977 ATP2B1P20020 1258 aa15.29■□□□□ 0.04
RNF43-201ENST00000407977 PTPN14Q15678 1187 aa15.29■□□□□ 0.04
RNF43-201ENST00000407977 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
RNF43-201ENST00000407977 KIF18AQ8NI77 898 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 FILIP1Q7Z7B0 1213 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
RNF43-201ENST00000407977 MCM3P25205 808 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 NEMFO60524 1076 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 CCDC158Q5M9N0 1113 aa15.28■□□□□ 0.04
RNF43-201ENST00000407977 NOL7Q9UMY1 257 aaKnown RBP15.28■□□□□ 0.04
RNF43-201ENST00000407977 FAM107BQ9H098 131 aa15.27■□□□□ 0.04
RNF43-201ENST00000407977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.27■□□□□ 0.04
RNF43-201ENST00000407977 CCDC102AQ96A19 550 aa15.27■□□□□ 0.04
RNF43-201ENST00000407977 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.04
RNF43-201ENST00000407977 SLC4A2P04920 1241 aa15.27■□□□□ 0.03
RNF43-201ENST00000407977 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
RNF43-201ENST00000407977 SYCE3A1L190 88 aa15.27■□□□□ 0.03
RNF43-201ENST00000407977 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.034e-8■■■■□ 21.6
RNF43-201ENST00000407977 MAP9Q49MG5 647 aa15.27■□□□□ 0.03
RNF43-201ENST00000407977 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.03
RNF43-201ENST00000407977 CCDC148Q8NFR7 591 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
RNF43-201ENST00000407977 EPB41L2O43491 1005 aaKnown RBP15.26■□□□□ 0.03
RNF43-201ENST00000407977 NEFHP12036 1026 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 ARHGAP29Q52LW3 1261 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
RNF43-201ENST00000407977 NACAP1Q9BZK3 213 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
RNF43-201ENST00000407977 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
RNF43-201ENST00000407977 SEPT7Q16181 437 aaKnown RBP15.25■□□□□ 0.03
RNF43-201ENST00000407977 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
RNF43-201ENST00000407977 CRACR2AQ9BSW2 395 aa15.25■□□□□ 0.03
RNF43-201ENST00000407977 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
RNF43-201ENST00000407977 PLEKHO1Q53GL0 409 aaPredicted RBP15.25■□□□□ 0.03
RNF43-201ENST00000407977 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
RNF43-201ENST00000407977 SKIDA1Q1XH10 827 aa15.25■□□□□ 0.03
RNF43-201ENST00000407977 WASF1Q92558 559 aa15.24■□□□□ 0.03
RNF43-201ENST00000407977 PLCD4Q9BRC7 762 aa15.24■□□□□ 0.03
RNF43-201ENST00000407977 ANO10Q9NW15 660 aa15.24■□□□□ 0.03
RNF43-201ENST00000407977 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
RNF43-201ENST00000407977 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
RNF43-201ENST00000407977 KRT18P05783 430 aaKnown RBP15.24■□□□□ 0.03
RNF43-201ENST00000407977 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
RNF43-201ENST00000407977 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
RNF43-201ENST00000407977 MPNDQ8N594 471 aa15.23■□□□□ 0.03
RNF43-201ENST00000407977 JAKMIP1Q96N16 626 aaKnown RBP15.23■□□□□ 0.03
RNF43-201ENST00000407977 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
RNF43-201ENST00000407977 CTAGE5O15320 804 aa15.23■□□□□ 0.03
RNF43-201ENST00000407977 EZRP15311 586 aaKnown RBP15.23■□□□□ 0.03
RNF43-201ENST00000407977 STK3Q13188 491 aa15.23■□□□□ 0.03
RNF43-201ENST00000407977 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
RNF43-201ENST00000407977 MSH5O43196 834 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 TTC39AQ5SRH9 613 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
RNF43-201ENST00000407977 DYNC1I1O14576 645 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 CCDC57Q2TAC2 916 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
RNF43-201ENST00000407977 CCDC69A6NI79 296 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 IMMTQ16891 758 aaKnown RBP15.22■□□□□ 0.03
RNF43-201ENST00000407977 CFAP100Q494V2 611 aa15.22■□□□□ 0.03
RNF43-201ENST00000407977 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
RNF43-201ENST00000407977 NLRP6P59044 892 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 GIMAP7Q8NHV1 300 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
RNF43-201ENST00000407977 CFAP70Q5T0N1 1121 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 TAF4BQ92750 862 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 PRIMPOLQ96LW4 560 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 LRRFIP2Q9Y608 721 aaKnown RBP15.21■□□□□ 0.03
RNF43-201ENST00000407977 ERBINQ96RT1 1412 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 FYB1O15117 783 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 ENOX2Q16206 610 aaKnown RBP15.21■□□□□ 0.03
RNF43-201ENST00000407977 CEP131Q9UPN4 1083 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
RNF43-201ENST00000407977 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
RNF43-201ENST00000407977 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
RNF43-201ENST00000407977 FCHSD2O94868 740 aa15.2■□□□□ 0.02
RNF43-201ENST00000407977 CAVIN2O95810 425 aa15.2■□□□□ 0.02
RNF43-201ENST00000407977 GSDMDP57764 484 aa15.2■□□□□ 0.02
RNF43-201ENST00000407977 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms