RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
CDK11B-204ENST00000407249 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
CDK11B-204ENST00000407249 MVPQ14764 893 aaKnown RBP20.55■□□□□ 0.88
CDK11B-204ENST00000407249 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
CDK11B-204ENST00000407249 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
CDK11B-204ENST00000407249 WASLO00401 505 aaPredicted RBP20.54■□□□□ 0.88
CDK11B-204ENST00000407249 MYH16Q9H6N6 1097 aa20.54■□□□□ 0.88
CDK11B-204ENST00000407249 WAPLQ7Z5K2 1190 aa20.53■□□□□ 0.88
CDK11B-204ENST00000407249 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
CDK11B-204ENST00000407249 FYB1O15117 783 aa20.52■□□□□ 0.88
CDK11B-204ENST00000407249 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
CDK11B-204ENST00000407249 COL3A1P02461 1466 aaPredicted RBP20.52■□□□□ 0.88
CDK11B-204ENST00000407249 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
CDK11B-204ENST00000407249 CDC42BPGQ6DT37 1551 aa20.51■□□□□ 0.87
CDK11B-204ENST00000407249 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
CDK11B-204ENST00000407249 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
CDK11B-204ENST00000407249 MCM4P33991 863 aa20.5■□□□□ 0.87
CDK11B-204ENST00000407249 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
CDK11B-204ENST00000407249 ZNF830Q96NB3 372 aaPredicted RBP20.5■□□□□ 0.87
CDK11B-204ENST00000407249 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
CDK11B-204ENST00000407249 FSD2A1L4K1 749 aa20.49■□□□□ 0.87
CDK11B-204ENST00000407249 DZIP1LQ8IYY4 767 aaKnown RBP20.49■□□□□ 0.87
CDK11B-204ENST00000407249 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
CDK11B-204ENST00000407249 PPIP5K1Q6PFW1 1433 aa20.49■□□□□ 0.87
CDK11B-204ENST00000407249 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
CDK11B-204ENST00000407249 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
CDK11B-204ENST00000407249 XRCC6P12956 609 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDK11B-204ENST00000407249 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
CDK11B-204ENST00000407249 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
CDK11B-204ENST00000407249 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
CDK11B-204ENST00000407249 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
CDK11B-204ENST00000407249 GOLGA6L3A6NEY3 463 aa20.47■□□□□ 0.87
CDK11B-204ENST00000407249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDK11B-204ENST00000407249 PLCD3Q8N3E9 789 aa20.47■□□□□ 0.87
CDK11B-204ENST00000407249 TMEM51Q9NW97 253 aa20.47■□□□□ 0.87
CDK11B-204ENST00000407249 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
CDK11B-204ENST00000407249 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
CDK11B-204ENST00000407249 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
CDK11B-204ENST00000407249 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
CDK11B-204ENST00000407249 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
CDK11B-204ENST00000407249 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDK11B-204ENST00000407249 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
CDK11B-204ENST00000407249 CLCN1P35523 988 aa20.45■□□□□ 0.86
CDK11B-204ENST00000407249 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
CDK11B-204ENST00000407249 CCDC61Q9Y6R9 512 aa20.44■□□□□ 0.86
CDK11B-204ENST00000407249 SMAP1Q8IYB5 467 aaPredicted RBP20.43■□□□□ 0.86
CDK11B-204ENST00000407249 NUDT16Q96DE0 195 aaKnown RBP20.43■□□□□ 0.86
CDK11B-204ENST00000407249 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
CDK11B-204ENST00000407249 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
CDK11B-204ENST00000407249 TRIM27P14373 513 aa20.43■□□□□ 0.86
CDK11B-204ENST00000407249 LTKP29376 864 aa20.43■□□□□ 0.86
CDK11B-204ENST00000407249 THEMISQ8N1K5 641 aaPredicted RBP20.43■□□□□ 0.86
CDK11B-204ENST00000407249 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
CDK11B-204ENST00000407249 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
CDK11B-204ENST00000407249 CDK11BP21127 795 aaKnown RBP20.42■□□□□ 0.86
CDK11B-204ENST00000407249 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
CDK11B-204ENST00000407249 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
CDK11B-204ENST00000407249 TRHP20396 242 aaPredicted RBP20.41■□□□□ 0.86
CDK11B-204ENST00000407249 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
CDK11B-204ENST00000407249 GZF1Q9H116 711 aaPredicted RBP20.41■□□□□ 0.86
CDK11B-204ENST00000407249 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
CDK11B-204ENST00000407249 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
CDK11B-204ENST00000407249 TRAK2O60296 914 aa20.41■□□□□ 0.86
CDK11B-204ENST00000407249 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
CDK11B-204ENST00000407249 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.4■□□□□ 0.86
CDK11B-204ENST00000407249 EXOSC9Q06265 439 aaKnown RBP20.4■□□□□ 0.86
CDK11B-204ENST00000407249 SMC5Q8IY18 1101 aa20.4■□□□□ 0.86
CDK11B-204ENST00000407249 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
CDK11B-204ENST00000407249 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
CDK11B-204ENST00000407249 PANK2Q9BZ23 570 aa20.39■□□□□ 0.85
CDK11B-204ENST00000407249 FBXO3Q9UK99 471 aa20.39■□□□□ 0.85
CDK11B-204ENST00000407249 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
CDK11B-204ENST00000407249 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
CDK11B-204ENST00000407249 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CDK11B-204ENST00000407249 TPM2P07951 284 aa20.37■□□□□ 0.85
CDK11B-204ENST00000407249 PLEKHF1Q96S99 279 aa20.37■□□□□ 0.85
CDK11B-204ENST00000407249 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
CDK11B-204ENST00000407249 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
CDK11B-204ENST00000407249 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
CDK11B-204ENST00000407249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
CDK11B-204ENST00000407249 TRIM35Q9UPQ4 493 aa20.36■□□□□ 0.85
CDK11B-204ENST00000407249 NRKQ7Z2Y5 1582 aa20.36■□□□□ 0.85
CDK11B-204ENST00000407249 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
CDK11B-204ENST00000407249 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
CDK11B-204ENST00000407249 XRN1Q8IZH2 1706 aaKnown RBP20.35■□□□□ 0.85
CDK11B-204ENST00000407249 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
CDK11B-204ENST00000407249 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
CDK11B-204ENST00000407249 DDIT3P35638 169 aa20.35■□□□□ 0.85
CDK11B-204ENST00000407249 MRE11P49959 708 aa20.35■□□□□ 0.85
CDK11B-204ENST00000407249 ZBTB40Q9NUA8 1239 aa20.35■□□□□ 0.85
CDK11B-204ENST00000407249 NOB1Q9ULX3 412 aaKnown RBP20.35■□□□□ 0.85
CDK11B-204ENST00000407249 DDX11L8A8MPP1 907 aa20.34■□□□□ 0.85
CDK11B-204ENST00000407249 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
CDK11B-204ENST00000407249 CNPY4Q8N129 248 aa20.34■□□□□ 0.85
CDK11B-204ENST00000407249 PRR36Q9H6K5 1346 aa20.34■□□□□ 0.85
CDK11B-204ENST00000407249 RIMS1Q86UR5 1692 aaKnown RBP20.34■□□□□ 0.85
CDK11B-204ENST00000407249 PLEKHG3A1L390 1219 aa20.33■□□□□ 0.85
CDK11B-204ENST00000407249 POLKQ9UBT6 870 aa20.33■□□□□ 0.85
CDK11B-204ENST00000407249 TMEM57Q8N5G2 664 aa20.33■□□□□ 0.84
CDK11B-204ENST00000407249 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms