RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 ABCC11Q96J66 1382 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 SMARCA5O60264 1052 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 RPAP2Q8IXW5 612 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 PLB1Q6P1J6 1458 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 ABCA5Q8WWZ7 1642 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 MAGI3Q5TCQ9 1506 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 FKBP5Q13451 457 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 SF3A1Q15459 793 aaKnown RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 AFAP1Q8N556 730 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 MNS1Q8NEH6 495 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 C16orf45Q96MC5 204 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 DENND4BO75064 1496 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-202ENST00000405010 BCORL1Q5H9F3 1711 aa8.86□□□□□ -0.99
HDAC9-202ENST00000405010 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 TTC22Q5TAA0 569 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 MYRIPQ8NFW9 859 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 NUP160Q12769 1436 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 LMBRD1Q9NUN5 540 aa8.85□□□□□ -0.99
HDAC9-202ENST00000405010 KIF20AO95235 890 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 GOLGA6L1Q8N7Z2 621 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 TSC1Q92574 1164 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 COG3Q96JB2 828 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 FCHSD2O94868 740 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 TNNT1P13805 278 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 KRT85P78386 507 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 NUP62CLQ9H1M0 184 aa8.84□□□□□ -0.99
HDAC9-202ENST00000405010 SYNJ2O15056 1496 aa8.84□□□□□ -1
HDAC9-202ENST00000405010 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -1
HDAC9-202ENST00000405010 PDCP20941 246 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 PDE4CQ08493 712 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 CCDC73Q6ZRK6 1079 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 SDSP20132 328 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 MAP3K11Q16584 847 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 GORABQ5T7V8 394 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 NPC1L1Q9UHC9 1359 aa8.83□□□□□ -1
HDAC9-202ENST00000405010 NUP153P49790 1475 aaKnown RBP8.82□□□□□ -1
HDAC9-202ENST00000405010 GNAI2P04899 355 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 NFE2L2Q16236 605 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 FILIP1Q7Z7B0 1213 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 TMEM63CQ9P1W3 806 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 GNAI3P08754 354 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 AEBP1Q8IUX7 1158 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 IL16Q14005 1332 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 ADGRF5Q8IZF2 1346 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 SLC4A2P04920 1241 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 C17orf53Q8N3J3 647 aaPredicted RBP8.82□□□□□ -1
HDAC9-202ENST00000405010 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 FAM135AQ9P2D6 1515 aa8.82□□□□□ -1
HDAC9-202ENST00000405010 SURF6O75683 361 aaKnown RBP8.81□□□□□ -1
HDAC9-202ENST00000405010 CAMK4Q16566 473 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 RNF20Q5VTR2 975 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 USP48Q86UV5 1035 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 PIBF1Q8WXW3 757 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 CALCOCO1Q9P1Z2 691 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
HDAC9-202ENST00000405010 CNTROBQ8N137 903 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 MBD5Q9P267 1494 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 A2MP01023 1474 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 UBE2HP62256 183 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 PTPN14Q15678 1187 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 FERMT3Q86UX7 667 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 C16orf71Q8IYS4 520 aaPredicted RBP8.81□□□□□ -1
HDAC9-202ENST00000405010 USP26Q9BXU7 913 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 WDR62O43379 1518 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 CD2BP2O95400 341 aaKnown RBP8.81□□□□□ -1
HDAC9-202ENST00000405010 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
HDAC9-202ENST00000405010 SDF4Q9BRK5 362 aa8.81□□□□□ -1
HDAC9-202ENST00000405010 CWC15Q9P013 229 aaKnown RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 HDAC5Q9UQL6 1122 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 IFIT2P09913 472 aaKnown RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 MX1P20591 662 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 FOSBP53539 338 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 CYP46A1Q9Y6A2 500 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 IBTKQ9P2D0 1353 aaPredicted RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 KINO60870 393 aaKnown RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC9-202ENST00000405010 PKP1Q13835 747 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 ARHGAP45Q92619 1136 aa8.8□□□□□ -1
HDAC9-202ENST00000405010 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
HDAC9-202ENST00000405010 SAMD9Q5K651 1589 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 CCDC83Q8IWF9 413 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 CKAP2LQ8IYA6 745 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 KRT222Q8N1A0 295 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 SPATA32Q96LK8 384 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 TIGD1Q96MW7 591 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 FEZ1Q99689 392 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms