RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
SCFD2-202ENST00000401642 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
SCFD2-202ENST00000401642 PRR36Q9H6K5 1346 aa13.91□□□□□ -0.18
SCFD2-202ENST00000401642 C16orf71Q8IYS4 520 aaPredicted RBP13.91□□□□□ -0.18
SCFD2-202ENST00000401642 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.18
SCFD2-202ENST00000401642 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
SCFD2-202ENST00000401642 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
SCFD2-202ENST00000401642 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
SCFD2-202ENST00000401642 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
SCFD2-202ENST00000401642 ACEP12821 1306 aa13.9□□□□□ -0.18
SCFD2-202ENST00000401642 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
SCFD2-202ENST00000401642 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
SCFD2-202ENST00000401642 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
SCFD2-202ENST00000401642 ZBTB7BO15156 539 aaPredicted RBP13.89□□□□□ -0.19
SCFD2-202ENST00000401642 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
SCFD2-202ENST00000401642 LTKP29376 864 aa13.89□□□□□ -0.19
SCFD2-202ENST00000401642 ARHGEF40Q8TER5 1519 aa13.89□□□□□ -0.19
SCFD2-202ENST00000401642 TMEM131LA2VDJ0 1609 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 F6X3S4 739 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
SCFD2-202ENST00000401642 IL16Q14005 1332 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 NUCB1Q02818 461 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 AAMPQ13685 434 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
SCFD2-202ENST00000401642 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
SCFD2-202ENST00000401642 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 OTUD7AQ8TE49 926 aaPredicted RBP13.87□□□□□ -0.19
SCFD2-202ENST00000401642 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 PREX1Q8TCU6 1659 aa13.87□□□□□ -0.19
SCFD2-202ENST00000401642 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
SCFD2-202ENST00000401642 AMPHP49418 695 aa13.86□□□□□ -0.19
SCFD2-202ENST00000401642 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCFD2-202ENST00000401642 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
SCFD2-202ENST00000401642 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
SCFD2-202ENST00000401642 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
SCFD2-202ENST00000401642 RICTORQ6R327 1708 aa13.86□□□□□ -0.19
SCFD2-202ENST00000401642 PNPLA6Q8IY17 1366 aa13.85□□□□□ -0.19
SCFD2-202ENST00000401642 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
SCFD2-202ENST00000401642 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
SCFD2-202ENST00000401642 ROBO2Q9HCK4 1378 aa13.84□□□□□ -0.19
SCFD2-202ENST00000401642 USHBP1Q8N6Y0 703 aa13.84□□□□□ -0.19
SCFD2-202ENST00000401642 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
SCFD2-202ENST00000401642 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
SCFD2-202ENST00000401642 VSIG10Q8N0Z9 540 aa13.83□□□□□ -0.19
SCFD2-202ENST00000401642 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.19
SCFD2-202ENST00000401642 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.19
SCFD2-202ENST00000401642 LMOD3Q0VAK6 560 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 TBC1D9Q6ZT07 1266 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 MEIS3Q99687 375 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 CPS1P31327 1500 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
SCFD2-202ENST00000401642 NLRP6P59044 892 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 G2E3Q7L622 706 aa13.83□□□□□ -0.2
SCFD2-202ENST00000401642 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
SCFD2-202ENST00000401642 LMOD2Q6P5Q4 547 aa13.82□□□□□ -0.2
SCFD2-202ENST00000401642 API5Q9BZZ5 524 aaKnown RBP13.82□□□□□ -0.2
SCFD2-202ENST00000401642 EDC4Q6P2E9 1401 aaKnown RBP13.81□□□□□ -0.2
SCFD2-202ENST00000401642 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
SCFD2-202ENST00000401642 EID1Q9Y6B2 187 aa13.81□□□□□ -0.2
SCFD2-202ENST00000401642 TNRQ92752 1358 aa13.8□□□□□ -0.2
SCFD2-202ENST00000401642 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
SCFD2-202ENST00000401642 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-202ENST00000401642 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
SCFD2-202ENST00000401642 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-202ENST00000401642 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
SCFD2-202ENST00000401642 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
SCFD2-202ENST00000401642 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 MCM4P33991 863 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 TPRNQ4KMQ1 711 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
SCFD2-202ENST00000401642 MAP3K19Q56UN5 1328 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 GCC1Q96CN9 775 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
SCFD2-202ENST00000401642 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
SCFD2-202ENST00000401642 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
SCFD2-202ENST00000401642 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
SCFD2-202ENST00000401642 PANK2Q9BZ23 570 aa13.77□□□□□ -0.2
SCFD2-202ENST00000401642 TRAK2O60296 914 aa13.77□□□□□ -0.21
SCFD2-202ENST00000401642 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
SCFD2-202ENST00000401642 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
SCFD2-202ENST00000401642 BMP2KLQ5H9B9 411 aa13.77□□□□□ -0.21
SCFD2-202ENST00000401642 CPSF1Q10570 1443 aaKnown RBP13.76□□□□□ -0.21
SCFD2-202ENST00000401642 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
SCFD2-202ENST00000401642 ABTB2Q8N961 1025 aa13.76□□□□□ -0.21
SCFD2-202ENST00000401642 EYA1Q99502 592 aa13.76□□□□□ -0.21
SCFD2-202ENST00000401642 ABCC4O15439 1325 aa13.76□□□□□ -0.21
SCFD2-202ENST00000401642 A0A0U1RQG5 324 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-202ENST00000401642 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
SCFD2-202ENST00000401642 PLEKHM2Q8IWE5 1019 aa13.75□□□□□ -0.21
SCFD2-202ENST00000401642 ATP7BP35670 1465 aa13.75□□□□□ -0.21
SCFD2-202ENST00000401642 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
SCFD2-202ENST00000401642 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms