RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 CBFA2T2O43439 604 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 LARP1BQ659C4 914 aaKnown RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 AEBP1Q8IUX7 1158 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 CCDC113Q9H0I3 377 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 CWC27Q6UX04 472 aaKnown RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 CCDC97Q96F63 343 aaPredicted RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 STRN4Q9NRL3 753 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 ERLIN1O75477 346 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 TWISTNBQ3B726 338 aaPredicted RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 PDRG1Q9NUG6 133 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 HMGN5P82970 282 aaKnown RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 PIP4K2AP48426 406 aaPredicted RBP10.23□□□□□ -0.77
CR1-206ENST00000400960 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.23□□□□□ -0.77
CR1-206ENST00000400960 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
CR1-206ENST00000400960 NEBLO76041 1014 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 PRKAR2BP31323 418 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 CASQ1P31415 396 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 GOLGA6L10A0A0M3HER8 536 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 PDCP20941 246 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 BCCIPQ9P287 314 aaKnown RBP eCLIP10.22□□□□□ -0.77
CR1-206ENST00000400960 MCM2P49736 904 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 FILIP1Q7Z7B0 1213 aa10.22□□□□□ -0.77
CR1-206ENST00000400960 JAKMIP1Q96N16 626 aaKnown RBP10.22□□□□□ -0.77
CR1-206ENST00000400960 SYCE3A1L190 88 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 GNAI3P08754 354 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 TCP11L2Q8N4U5 519 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 CEP57L1Q8IYX8 460 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 DDX11Q96FC9 970 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 TRERF1Q96PN7 1200 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 AACSQ86V21 672 aa10.21□□□□□ -0.77
CR1-206ENST00000400960 USP5P45974 858 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 SOGA3Q5TF21 947 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 GIMAP7Q8NHV1 300 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 WDR33Q9C0J8 1336 aaKnown RBP10.21□□□□□ -0.78
CR1-206ENST00000400960 DNA2P51530 1060 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 NLRP6P59044 892 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 TRIM22Q8IYM9 498 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 ZFP91Q96JP5 570 aaPredicted RBP10.21□□□□□ -0.78
CR1-206ENST00000400960 MAP2K1Q02750 393 aaPredicted RBP10.21□□□□□ -0.78
CR1-206ENST00000400960 NUP62CLQ9H1M0 184 aa10.21□□□□□ -0.78
CR1-206ENST00000400960 KRT85P78386 507 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 JMYQ8N9B5 988 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 LUC7LQ9NQ29 371 aaKnown RBP10.2□□□□□ -0.78
CR1-206ENST00000400960 MPHOSPH10O00566 681 aaKnown RBP10.2□□□□□ -0.78
CR1-206ENST00000400960 UPF3BQ9BZI7 483 aaKnown RBP10.2□□□□□ -0.78
CR1-206ENST00000400960 CFAP45Q9UL16 551 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 ANKRD1Q15327 319 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 EPB41L2O43491 1005 aaKnown RBP10.2□□□□□ -0.78
CR1-206ENST00000400960 ZNF76P36508 570 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
CR1-206ENST00000400960 ESCO1Q5FWF5 840 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 IQCEQ6IPM2 695 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
CR1-206ENST00000400960 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 JAKMIP3Q5VZ66 844 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 PDCL2Q8N4E4 241 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 CCDC178Q5BJE1 867 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 NOL7Q9UMY1 257 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 EZRP15311 586 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 CCDC85AQ96PX6 553 aaPredicted RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
CR1-206ENST00000400960 CHD1LQ86WJ1 897 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 TAF4BQ92750 862 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 JPH4Q96JJ6 628 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 INCENPQ9NQS7 918 aa10.19□□□□□ -0.78
CR1-206ENST00000400960 TDO2P48775 406 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 CABP4P57796 275 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 CHMP4BP1P59074 171 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 DHX8Q14562 1220 aaKnown RBP10.18□□□□□ -0.78
CR1-206ENST00000400960 WASHC2AQ641Q2 1341 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 TNNT1P13805 278 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
CR1-206ENST00000400960 RAI14Q9P0K7 980 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 TMCO3Q6UWJ1 677 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 CFAP100Q494V2 611 aa10.18□□□□□ -0.78
CR1-206ENST00000400960 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
CR1-206ENST00000400960 TXLNBQ8N3L3 684 aa10.17□□□□□ -0.78
CR1-206ENST00000400960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.17□□□□□ -0.78
CR1-206ENST00000400960 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
CR1-206ENST00000400960 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
CR1-206ENST00000400960 ZSCAN29Q8IWY8 852 aaPredicted RBP10.17□□□□□ -0.78
CR1-206ENST00000400960 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
CR1-206ENST00000400960 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms