RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
CSNK2A1-203ENST00000400217 NFAT5O94916 1531 aa22.43■■□□□ 1.18
CSNK2A1-203ENST00000400217 USP19O94966 1318 aa22.43■■□□□ 1.18
CSNK2A1-203ENST00000400217 HOXC9P31274 260 aa22.42■■□□□ 1.18
CSNK2A1-203ENST00000400217 SLIT3O75094 1523 aa22.42■■□□□ 1.18
CSNK2A1-203ENST00000400217 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
CSNK2A1-203ENST00000400217 GCP02774 474 aa22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 TMPOP42166 694 aaKnown RBP22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 RTL1A6NKG5 1358 aa22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 NEFLP07196 543 aa22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 SLFN5Q08AF3 891 aa22.41■■□□□ 1.18
CSNK2A1-203ENST00000400217 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
CSNK2A1-203ENST00000400217 IP6K1Q92551 441 aa22.39■■□□□ 1.17
CSNK2A1-203ENST00000400217 SPATA31A3Q5VYP0 1347 aa22.38■■□□□ 1.17
CSNK2A1-203ENST00000400217 TNS3Q68CZ2 1445 aa22.38■■□□□ 1.17
CSNK2A1-203ENST00000400217 E9PSI1 815 aa22.38■■□□□ 1.17
CSNK2A1-203ENST00000400217 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
CSNK2A1-203ENST00000400217 TRMT2AQ8IZ69 625 aaKnown RBP22.38■■□□□ 1.17
CSNK2A1-203ENST00000400217 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
CSNK2A1-203ENST00000400217 LTN1O94822 1766 aa22.37■■□□□ 1.17
CSNK2A1-203ENST00000400217 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
CSNK2A1-203ENST00000400217 ARHGEF10O15013 1369 aa22.36■■□□□ 1.17
CSNK2A1-203ENST00000400217 RIPK4P57078 832 aa22.36■■□□□ 1.17
CSNK2A1-203ENST00000400217 ARHGEF25Q86VW2 580 aa22.36■■□□□ 1.17
CSNK2A1-203ENST00000400217 PHACTR3Q96KR7 559 aa22.36■■□□□ 1.17
CSNK2A1-203ENST00000400217 RGPD1P0DJD0 1748 aa22.36■■□□□ 1.17
CSNK2A1-203ENST00000400217 SPINK5Q9NQ38 1064 aaPredicted RBP22.35■■□□□ 1.17
CSNK2A1-203ENST00000400217 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
CSNK2A1-203ENST00000400217 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 PHRF1Q9P1Y6 1649 aaKnown RBP22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 FKBP8Q14318 412 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 NFE2L2Q16236 605 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 EYA1Q99502 592 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 TRIM35Q9UPQ4 493 aa22.34■■□□□ 1.17
CSNK2A1-203ENST00000400217 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.17
CSNK2A1-203ENST00000400217 ZBTB7CA1YPR0 619 aa22.33■■□□□ 1.16
CSNK2A1-203ENST00000400217 IGSF1Q8N6C5 1336 aa22.33■■□□□ 1.16
CSNK2A1-203ENST00000400217 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
CSNK2A1-203ENST00000400217 LTV1Q96GA3 475 aaPredicted RBP22.3■■□□□ 1.16
CSNK2A1-203ENST00000400217 KDRP35968 1356 aa22.3■■□□□ 1.16
CSNK2A1-203ENST00000400217 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
CSNK2A1-203ENST00000400217 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.16
CSNK2A1-203ENST00000400217 IL16Q14005 1332 aa22.27■■□□□ 1.16
CSNK2A1-203ENST00000400217 NHSL1Q5SYE7 1610 aa22.27■■□□□ 1.16
CSNK2A1-203ENST00000400217 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
CSNK2A1-203ENST00000400217 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
CSNK2A1-203ENST00000400217 CRYBG1Q9Y4K1 1723 aa22.23■■□□□ 1.15
CSNK2A1-203ENST00000400217 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
CSNK2A1-203ENST00000400217 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
CSNK2A1-203ENST00000400217 NBPF6Q5VWK0 638 aa22.22■■□□□ 1.15
CSNK2A1-203ENST00000400217 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
CSNK2A1-203ENST00000400217 NBPF4Q96M43 638 aa22.22■■□□□ 1.15
CSNK2A1-203ENST00000400217 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
CSNK2A1-203ENST00000400217 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
CSNK2A1-203ENST00000400217 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
CSNK2A1-203ENST00000400217 CPDO75976 1380 aa22.2■■□□□ 1.14
CSNK2A1-203ENST00000400217 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.14
CSNK2A1-203ENST00000400217 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
CSNK2A1-203ENST00000400217 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
CSNK2A1-203ENST00000400217 USHBP1Q8N6Y0 703 aa22.19■■□□□ 1.14
CSNK2A1-203ENST00000400217 GAS2L2Q8NHY3 880 aa22.18■■□□□ 1.14
CSNK2A1-203ENST00000400217 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
CSNK2A1-203ENST00000400217 ABCC6O95255 1503 aa22.18■■□□□ 1.14
CSNK2A1-203ENST00000400217 COL18A1P39060 1754 aa22.17■■□□□ 1.14
CSNK2A1-203ENST00000400217 KIAA0232Q92628 1395 aa22.17■■□□□ 1.14
CSNK2A1-203ENST00000400217 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
CSNK2A1-203ENST00000400217 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
CSNK2A1-203ENST00000400217 THUMPD2Q9BTF0 503 aaKnown RBP22.16■■□□□ 1.14
CSNK2A1-203ENST00000400217 ERBB3P21860 1342 aa22.16■■□□□ 1.14
CSNK2A1-203ENST00000400217 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
CSNK2A1-203ENST00000400217 TOM1O60784 492 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 HAP1P54257 671 aaPredicted RBP22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 GNAI1P63096 354 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 IFT57Q9NWB7 429 aa22.15■■□□□ 1.14
CSNK2A1-203ENST00000400217 CT47B1P0C2W7 299 aaPredicted RBP22.13■■□□□ 1.13
CSNK2A1-203ENST00000400217 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
CSNK2A1-203ENST00000400217 LAS1LQ9Y4W2 734 aaKnown RBP22.13■■□□□ 1.13
CSNK2A1-203ENST00000400217 HTATSF1O43719 755 aaKnown RBP22.12■■□□□ 1.13
CSNK2A1-203ENST00000400217 ZNF853P0CG23 659 aa22.12■■□□□ 1.13
CSNK2A1-203ENST00000400217 RTF1Q92541 710 aaKnown RBP22.12■■□□□ 1.13
CSNK2A1-203ENST00000400217 PRDM11Q9NQV5 511 aa22.12■■□□□ 1.13
CSNK2A1-203ENST00000400217 CAMTA1Q9Y6Y1 1673 aa22.11■■□□□ 1.13
CSNK2A1-203ENST00000400217 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
CSNK2A1-203ENST00000400217 CFAP44Q96MT7 982 aa22.11■■□□□ 1.13
CSNK2A1-203ENST00000400217 ABCA3Q99758 1704 aa22.11■■□□□ 1.13
CSNK2A1-203ENST00000400217 MCM10Q7L590 875 aa22.1■■□□□ 1.13
CSNK2A1-203ENST00000400217 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
CSNK2A1-203ENST00000400217 GNAT3A8MTJ3 354 aa22.09■■□□□ 1.13
CSNK2A1-203ENST00000400217 NLRP2Q9NX02 1062 aa22.09■■□□□ 1.13
CSNK2A1-203ENST00000400217 PLIN1O60240 522 aa22.09■■□□□ 1.13
CSNK2A1-203ENST00000400217 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
CSNK2A1-203ENST00000400217 RARSP54136 660 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms