RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 MYO1BO43795 1136 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 CBX1P83916 185 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 PDILTQ8N807 584 aa13.03□□□□□ -0.32
CACNA1C-216ENST00000399638 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 HFM1A2PYH4 1435 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 TIAM1Q13009 1591 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 IL27Q8NEV9 243 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.32
CACNA1C-216ENST00000399638 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-216ENST00000399638 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
CACNA1C-216ENST00000399638 RFC4P35249 363 aa13.02□□□□□ -0.33
CACNA1C-216ENST00000399638 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
CACNA1C-216ENST00000399638 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 TDO2P48775 406 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 CDR1P51861 262 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
CACNA1C-216ENST00000399638 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
CACNA1C-216ENST00000399638 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
CACNA1C-216ENST00000399638 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
CACNA1C-216ENST00000399638 ABCF2Q9UG63 623 aa13□□□□□ -0.33
CACNA1C-216ENST00000399638 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
CACNA1C-216ENST00000399638 GNAI1P63096 354 aa13□□□□□ -0.33
CACNA1C-216ENST00000399638 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
CACNA1C-216ENST00000399638 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
CACNA1C-216ENST00000399638 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
CACNA1C-216ENST00000399638 MYO6Q9UM54 1294 aa13□□□□□ -0.33
CACNA1C-216ENST00000399638 SEPT7Q16181 437 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 TAX1BP1Q86VP1 789 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 ST5P78524 1137 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 CCDC73Q6ZRK6 1079 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 REC8O95072 547 aa12.99□□□□□ -0.33
CACNA1C-216ENST00000399638 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 EXOC5O00471 708 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-216ENST00000399638 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 DYDC1Q8WWB3 177 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 CUL5Q93034 780 aa12.97□□□□□ -0.33
CACNA1C-216ENST00000399638 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CACNA1C-216ENST00000399638 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
CACNA1C-216ENST00000399638 CCDC181Q5TID7 509 aa12.96□□□□□ -0.33
CACNA1C-216ENST00000399638 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
CACNA1C-216ENST00000399638 FAM193AP78312 1265 aa12.96□□□□□ -0.34
CACNA1C-216ENST00000399638 APAF1O14727 1248 aa12.96□□□□□ -0.34
CACNA1C-216ENST00000399638 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.34
CACNA1C-216ENST00000399638 NFKBIBQ15653 356 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 PSMA5P28066 241 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 GPR162Q16538 588 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 USP47Q96K76 1375 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-216ENST00000399638 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
CACNA1C-216ENST00000399638 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
CACNA1C-216ENST00000399638 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms