RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 SOX12O15370 315 aa18.31■□□□□ 0.52
CCDC144A-205ENST00000399264 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
CCDC144A-205ENST00000399264 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
CCDC144A-205ENST00000399264 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
CCDC144A-205ENST00000399264 TWISTNBQ3B726 338 aaPredicted RBP18.3■□□□□ 0.52
CCDC144A-205ENST00000399264 ZNF853P0CG23 659 aa18.29■□□□□ 0.52
CCDC144A-205ENST00000399264 COG3Q96JB2 828 aa18.29■□□□□ 0.52
CCDC144A-205ENST00000399264 ATP7BP35670 1465 aa18.28■□□□□ 0.52
CCDC144A-205ENST00000399264 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
CCDC144A-205ENST00000399264 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
CCDC144A-205ENST00000399264 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
CCDC144A-205ENST00000399264 GNAI1P63096 354 aa18.27■□□□□ 0.52
CCDC144A-205ENST00000399264 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
CCDC144A-205ENST00000399264 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
CCDC144A-205ENST00000399264 SETD1AO15047 1707 aaKnown RBP18.27■□□□□ 0.52
CCDC144A-205ENST00000399264 IFT57Q9NWB7 429 aa18.27■□□□□ 0.52
CCDC144A-205ENST00000399264 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.51
CCDC144A-205ENST00000399264 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
CCDC144A-205ENST00000399264 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
CCDC144A-205ENST00000399264 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
CCDC144A-205ENST00000399264 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
CCDC144A-205ENST00000399264 MCM10Q7L590 875 aa18.25■□□□□ 0.51
CCDC144A-205ENST00000399264 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
CCDC144A-205ENST00000399264 DLG5Q8TDM6 1919 aa18.24■□□□□ 0.51
CCDC144A-205ENST00000399264 CD2BP2O95400 341 aaKnown RBP18.24■□□□□ 0.51
CCDC144A-205ENST00000399264 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
CCDC144A-205ENST00000399264 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
CCDC144A-205ENST00000399264 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
CCDC144A-205ENST00000399264 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
CCDC144A-205ENST00000399264 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
CCDC144A-205ENST00000399264 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 HSP90AB2PQ58FF8 381 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 C16orf71Q8IYS4 520 aaPredicted RBP18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 SPATA31D1Q6ZQQ2 1576 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 DIP2BQ9P265 1576 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 ABCC4O15439 1325 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 KIF2CQ99661 725 aa18.22■□□□□ 0.51
CCDC144A-205ENST00000399264 ROBO2Q9HCK4 1378 aa18.21■□□□□ 0.51
CCDC144A-205ENST00000399264 MCM4P33991 863 aa18.21■□□□□ 0.51
CCDC144A-205ENST00000399264 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
CCDC144A-205ENST00000399264 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
CCDC144A-205ENST00000399264 PTCH1Q13635 1447 aa18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 APBB1O00213 710 aa18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
CCDC144A-205ENST00000399264 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 FOXO3O43524 673 aa18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
CCDC144A-205ENST00000399264 ACEP12821 1306 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 RBM25P49756 843 aaKnown RBP18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 CHMP5Q9NZZ3 219 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 LTKP29376 864 aa18.18■□□□□ 0.5
CCDC144A-205ENST00000399264 AGLP35573 1532 aa18.17■□□□□ 0.5
CCDC144A-205ENST00000399264 TTC21BQ7Z4L5 1316 aa18.17■□□□□ 0.5
CCDC144A-205ENST00000399264 GSPT1P15170 499 aaKnown RBP18.17■□□□□ 0.5
CCDC144A-205ENST00000399264 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
CCDC144A-205ENST00000399264 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC144A-205ENST00000399264 SMARCA5O60264 1052 aaPredicted RBP18.15■□□□□ 0.5
CCDC144A-205ENST00000399264 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.5
CCDC144A-205ENST00000399264 LMOD3Q0VAK6 560 aa18.14■□□□□ 0.49
CCDC144A-205ENST00000399264 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
CCDC144A-205ENST00000399264 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.49
CCDC144A-205ENST00000399264 TRAK2O60296 914 aa18.13■□□□□ 0.49
CCDC144A-205ENST00000399264 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
CCDC144A-205ENST00000399264 DDIT3P35638 169 aa18.13■□□□□ 0.49
CCDC144A-205ENST00000399264 XRCC6P12956 609 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC144A-205ENST00000399264 MEIS3Q99687 375 aa18.12■□□□□ 0.49
CCDC144A-205ENST00000399264 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
CCDC144A-205ENST00000399264 CHL1O00533 1208 aa18.12■□□□□ 0.49
CCDC144A-205ENST00000399264 HSP90AB1P08238 724 aaKnown RBP18.12■□□□□ 0.49
CCDC144A-205ENST00000399264 C3P01024 1663 aa18.11■□□□□ 0.49
CCDC144A-205ENST00000399264 F6X3S4 739 aa18.11■□□□□ 0.49
CCDC144A-205ENST00000399264 G2E3Q7L622 706 aa18.11■□□□□ 0.49
CCDC144A-205ENST00000399264 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
CCDC144A-205ENST00000399264 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 REREQ9P2R6 1566 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 RGS12O14924 1447 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 DCTPP1Q9H773 170 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 TNRQ92752 1358 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
CCDC144A-205ENST00000399264 SNX21Q969T3 373 aa18.09■□□□□ 0.49
CCDC144A-205ENST00000399264 ADAMTS13Q76LX8 1427 aa18.09■□□□□ 0.49
CCDC144A-205ENST00000399264 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
CCDC144A-205ENST00000399264 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
CCDC144A-205ENST00000399264 MAP3K19Q56UN5 1328 aa18.09■□□□□ 0.49
CCDC144A-205ENST00000399264 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.49
CCDC144A-205ENST00000399264 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.49
CCDC144A-205ENST00000399264 MSH6P52701 1360 aa18.08■□□□□ 0.49
CCDC144A-205ENST00000399264 TECPR2O15040 1411 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms