RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
PDZD2-201ENST00000397559 ADH1CP00326 375 aa11.38□□□□□ -0.59
PDZD2-201ENST00000397559 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
PDZD2-201ENST00000397559 GDPD2Q9HCC8 539 aa11.38□□□□□ -0.59
PDZD2-201ENST00000397559 AVPP01185 164 aa11.37□□□□□ -0.59
PDZD2-201ENST00000397559 FBXO45P0C2W1 286 aa11.37□□□□□ -0.59
PDZD2-201ENST00000397559 NNTQ13423 1086 aa11.37□□□□□ -0.59
PDZD2-201ENST00000397559 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
PDZD2-201ENST00000397559 FLIIQ13045 1269 aa11.36□□□□□ -0.59
PDZD2-201ENST00000397559 FSHRP23945 695 aa11.35□□□□□ -0.59
PDZD2-201ENST00000397559 GRM5P41594 1212 aa11.35□□□□□ -0.59
PDZD2-201ENST00000397559 ABL2P42684 1182 aa11.35□□□□□ -0.59
PDZD2-201ENST00000397559 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
PDZD2-201ENST00000397559 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
PDZD2-201ENST00000397559 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
PDZD2-201ENST00000397559 AXIN1O15169 862 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 NR1H3Q13133 447 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 NR5A1Q13285 461 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 AAASQ9NRG9 546 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 SMARCA4P51532 1647 aa11.33□□□□□ -0.6
PDZD2-201ENST00000397559 NR3C2P08235 984 aa11.32□□□□□ -0.6
PDZD2-201ENST00000397559 CTC1Q2NKJ3 1217 aa11.32□□□□□ -0.6
PDZD2-201ENST00000397559 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
PDZD2-201ENST00000397559 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
PDZD2-201ENST00000397559 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
PDZD2-201ENST00000397559 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
PDZD2-201ENST00000397559 IRF5Q13568 498 aa11.31□□□□□ -0.6
PDZD2-201ENST00000397559 POM121Q96HA1 1249 aa11.31□□□□□ -0.6
PDZD2-201ENST00000397559 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
PDZD2-201ENST00000397559 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
PDZD2-201ENST00000397559 CRIPAKQ8N1N5 446 aa11.3□□□□□ -0.6
PDZD2-201ENST00000397559 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
PDZD2-201ENST00000397559 WDR4P57081 412 aaKnown RBP11.29□□□□□ -0.6
PDZD2-201ENST00000397559 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
PDZD2-201ENST00000397559 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
PDZD2-201ENST00000397559 NESP48681 1621 aa11.28□□□□□ -0.6
PDZD2-201ENST00000397559 CAPN5O15484 640 aaPredicted RBP11.28□□□□□ -0.6
PDZD2-201ENST00000397559 RAD21O60216 631 aa11.28□□□□□ -0.6
PDZD2-201ENST00000397559 RAB15P59190 212 aa11.28□□□□□ -0.6
PDZD2-201ENST00000397559 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
PDZD2-201ENST00000397559 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
PDZD2-201ENST00000397559 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
PDZD2-201ENST00000397559 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
PDZD2-201ENST00000397559 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
PDZD2-201ENST00000397559 ZIC2O95409 532 aaPredicted RBP11.26□□□□□ -0.61
PDZD2-201ENST00000397559 TIMP2P16035 220 aa11.26□□□□□ -0.61
PDZD2-201ENST00000397559 INTS6LQ5JSJ4 861 aaKnown RBP11.26□□□□□ -0.61
PDZD2-201ENST00000397559 ITPKCQ96DU7 683 aa11.25□□□□□ -0.61
PDZD2-201ENST00000397559 KLF16Q9BXK1 252 aaPredicted RBP11.25□□□□□ -0.61
PDZD2-201ENST00000397559 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
PDZD2-201ENST00000397559 GIGYF1O75420 1035 aaPredicted RBP11.23□□□□□ -0.61
PDZD2-201ENST00000397559 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
PDZD2-201ENST00000397559 EMILIN1Q9Y6C2 1016 aa11.23□□□□□ -0.61
PDZD2-201ENST00000397559 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDZD2-201ENST00000397559 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
PDZD2-201ENST00000397559 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
PDZD2-201ENST00000397559 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
PDZD2-201ENST00000397559 PDS5BQ9NTI5 1447 aa11.22□□□□□ -0.61
PDZD2-201ENST00000397559 ESPNB1AK53 854 aa11.21□□□□□ -0.61
PDZD2-201ENST00000397559 BMP1P13497 986 aa11.21□□□□□ -0.61
PDZD2-201ENST00000397559 MCCD1P59942 119 aaPredicted RBP11.21□□□□□ -0.61
PDZD2-201ENST00000397559 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
PDZD2-201ENST00000397559 CLUAP1Q96AJ1 413 aa11.21□□□□□ -0.61
PDZD2-201ENST00000397559 ATP13A2Q9NQ11 1180 aa11.21□□□□□ -0.61
PDZD2-201ENST00000397559 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
PDZD2-201ENST00000397559 TMPRSS4Q9NRS4 437 aa11.2□□□□□ -0.62
PDZD2-201ENST00000397559 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
PDZD2-201ENST00000397559 ERVH48-1M5A8F1 160 aa11.19□□□□□ -0.62
PDZD2-201ENST00000397559 POTECB2RU33 542 aa11.18□□□□□ -0.62
PDZD2-201ENST00000397559 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
PDZD2-201ENST00000397559 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
PDZD2-201ENST00000397559 ZNF787Q6DD87 383 aa11.17□□□□□ -0.62
PDZD2-201ENST00000397559 TRIM46Q7Z4K8 759 aa11.17□□□□□ -0.62
PDZD2-201ENST00000397559 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
PDZD2-201ENST00000397559 CBLBQ13191 982 aa11.16□□□□□ -0.62
PDZD2-201ENST00000397559 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
PDZD2-201ENST00000397559 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
PDZD2-201ENST00000397559 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
PDZD2-201ENST00000397559 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
PDZD2-201ENST00000397559 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
PDZD2-201ENST00000397559 WDR62O43379 1518 aa11.14□□□□□ -0.63
PDZD2-201ENST00000397559 MEIOBQ8N635 442 aa11.14□□□□□ -0.63
PDZD2-201ENST00000397559 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
PDZD2-201ENST00000397559 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
PDZD2-201ENST00000397559 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
PDZD2-201ENST00000397559 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
PDZD2-201ENST00000397559 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
PDZD2-201ENST00000397559 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
PDZD2-201ENST00000397559 POM121CA8CG34 1229 aa11.12□□□□□ -0.63
PDZD2-201ENST00000397559 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
PDZD2-201ENST00000397559 SOX11P35716 441 aa11.12□□□□□ -0.63
PDZD2-201ENST00000397559 SCARF1Q14162 830 aa11.12□□□□□ -0.63
PDZD2-201ENST00000397559 C6orf118Q5T5N4 469 aa11.12□□□□□ -0.63
PDZD2-201ENST00000397559 UPP2O95045 317 aa11.11□□□□□ -0.63
PDZD2-201ENST00000397559 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
PDZD2-201ENST00000397559 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
PDZD2-201ENST00000397559 ZFP42Q96MM3 310 aa11.11□□□□□ -0.63
PDZD2-201ENST00000397559 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
PDZD2-201ENST00000397559 LILRA1O75019 489 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms