RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 FBLN1P23142 703 aa25.13■■□□□ 1.61
TSPAN4-204ENST00000397404 CPDO75976 1380 aa25.12■■□□□ 1.61
TSPAN4-204ENST00000397404 MAPK8IP3Q9UPT6 1336 aa25.11■■□□□ 1.61
TSPAN4-204ENST00000397404 EIF4A2Q14240 407 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-204ENST00000397404 CRYBG1Q9Y4K1 1723 aa25.1■■□□□ 1.61
TSPAN4-204ENST00000397404 SOX12O15370 315 aa25.09■■□□□ 1.61
TSPAN4-204ENST00000397404 CCDC27Q2M243 656 aa25.09■■□□□ 1.61
TSPAN4-204ENST00000397404 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
TSPAN4-204ENST00000397404 DDX17Q92841 729 aaKnown RBP25.09■■□□□ 1.61
TSPAN4-204ENST00000397404 RGPD1P0DJD0 1748 aa25.08■■□□□ 1.61
TSPAN4-204ENST00000397404 PLEKHF1Q96S99 279 aa25.08■■□□□ 1.6
TSPAN4-204ENST00000397404 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
TSPAN4-204ENST00000397404 KDRP35968 1356 aa25.06■■□□□ 1.6
TSPAN4-204ENST00000397404 APAF1O14727 1248 aa25.05■■□□□ 1.6
TSPAN4-204ENST00000397404 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
TSPAN4-204ENST00000397404 PLEKHG2Q9H7P9 1386 aa25.04■■□□□ 1.6
TSPAN4-204ENST00000397404 COL22A1Q8NFW1 1626 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-204ENST00000397404 CCDC146Q8IYE0 955 aa25.03■■□□□ 1.6
TSPAN4-204ENST00000397404 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
TSPAN4-204ENST00000397404 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
TSPAN4-204ENST00000397404 ZNF521Q96K83 1311 aa25.02■■□□□ 1.6
TSPAN4-204ENST00000397404 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
TSPAN4-204ENST00000397404 PRKAR2BP31323 418 aa25■■□□□ 1.59
TSPAN4-204ENST00000397404 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
TSPAN4-204ENST00000397404 FAM208AQ9UK61 1670 aaKnown RBP25■■□□□ 1.59
TSPAN4-204ENST00000397404 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
TSPAN4-204ENST00000397404 PHLPP1O60346 1717 aa24.99■■□□□ 1.59
TSPAN4-204ENST00000397404 HAP1P54257 671 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-204ENST00000397404 WDR63Q8IWG1 891 aa24.98■■□□□ 1.59
TSPAN4-204ENST00000397404 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
TSPAN4-204ENST00000397404 GOLGA2Q08379 1002 aa24.97■■□□□ 1.59
TSPAN4-204ENST00000397404 SULT6B1Q6IMI4 303 aa24.97■■□□□ 1.59
TSPAN4-204ENST00000397404 COL16A1Q07092 1604 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-204ENST00000397404 NCAPD2Q15021 1401 aa24.97■■□□□ 1.59
TSPAN4-204ENST00000397404 TMPOP42166 694 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-204ENST00000397404 EYA1Q99502 592 aa24.96■■□□□ 1.59
TSPAN4-204ENST00000397404 CALD1Q05682 793 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-204ENST00000397404 COL18A1P39060 1754 aa24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 HMOX1P09601 288 aa24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 ZC3H6P61129 1189 aaKnown RBP24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 WWC1Q8IX03 1113 aa24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 ERBB3P21860 1342 aa24.95■■□□□ 1.58
TSPAN4-204ENST00000397404 KIAA0232Q92628 1395 aa24.94■■□□□ 1.58
TSPAN4-204ENST00000397404 E9PSI1 815 aa24.94■■□□□ 1.58
TSPAN4-204ENST00000397404 CAMTA1Q9Y6Y1 1673 aa24.94■■□□□ 1.58
TSPAN4-204ENST00000397404 ANKRD24Q8TF21 1146 aa24.93■■□□□ 1.58
TSPAN4-204ENST00000397404 IL16Q14005 1332 aa24.93■■□□□ 1.58
TSPAN4-204ENST00000397404 PRDM11Q9NQV5 511 aa24.92■■□□□ 1.58
TSPAN4-204ENST00000397404 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
TSPAN4-204ENST00000397404 CABLES1Q8TDN4 633 aa24.9■■□□□ 1.58
TSPAN4-204ENST00000397404 ZBTB7CA1YPR0 619 aa24.89■■□□□ 1.58
TSPAN4-204ENST00000397404 RIPK4P57078 832 aa24.89■■□□□ 1.58
TSPAN4-204ENST00000397404 PIP4K2BP78356 416 aa24.89■■□□□ 1.57
TSPAN4-204ENST00000397404 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.57
TSPAN4-204ENST00000397404 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
TSPAN4-204ENST00000397404 HTATSF1O43719 755 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-204ENST00000397404 AXIN2Q9Y2T1 843 aa24.87■■□□□ 1.57
TSPAN4-204ENST00000397404 SLFN5Q08AF3 891 aa24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 AMOTQ4VCS5 1084 aa24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 AEBP1Q8IUX7 1158 aa24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 TRMT2AQ8IZ69 625 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 LTV1Q96GA3 475 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 MYH16Q9H6N6 1097 aa24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 COL14A1Q05707 1796 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-204ENST00000397404 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
TSPAN4-204ENST00000397404 PHACTR3Q96KR7 559 aa24.85■■□□□ 1.57
TSPAN4-204ENST00000397404 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
TSPAN4-204ENST00000397404 NEUROD2Q15784 382 aa24.84■■□□□ 1.57
TSPAN4-204ENST00000397404 JCADQ9P266 1359 aa24.84■■□□□ 1.57
TSPAN4-204ENST00000397404 TRIM35Q9UPQ4 493 aa24.83■■□□□ 1.57
TSPAN4-204ENST00000397404 WDR17Q8IZU2 1322 aa24.83■■□□□ 1.57
TSPAN4-204ENST00000397404 RRP7AQ9Y3A4 280 aaKnown RBP24.83■■□□□ 1.56
TSPAN4-204ENST00000397404 RGPD5Q99666 1765 aa24.82■■□□□ 1.56
TSPAN4-204ENST00000397404 PLEKHG5O94827 1062 aa24.82■■□□□ 1.56
TSPAN4-204ENST00000397404 COL5A2P05997 1499 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-204ENST00000397404 CSB-PGBD3P0DP91 1061 aa24.81■■□□□ 1.56
TSPAN4-204ENST00000397404 DUSP27Q5VZP5 1158 aa24.81■■□□□ 1.56
TSPAN4-204ENST00000397404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.81■■□□□ 1.56
TSPAN4-204ENST00000397404 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
TSPAN4-204ENST00000397404 CT47B1P0C2W7 299 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-204ENST00000397404 CHRNA2Q15822 529 aa24.78■■□□□ 1.56
TSPAN4-204ENST00000397404 RTF1Q92541 710 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-204ENST00000397404 SPATA31A6Q5VVP1 1343 aa24.78■■□□□ 1.56
TSPAN4-204ENST00000397404 RAPGEF4Q8WZA2 1011 aa24.77■■□□□ 1.56
TSPAN4-204ENST00000397404 NLRP2Q9NX02 1062 aa24.77■■□□□ 1.56
TSPAN4-204ENST00000397404 DLG5Q8TDM6 1919 aa24.77■■□□□ 1.56
TSPAN4-204ENST00000397404 CDCA7LQ96GN5 454 aa24.77■■□□□ 1.56
TSPAN4-204ENST00000397404 FAM83GA6ND36 823 aa24.76■■□□□ 1.55
TSPAN4-204ENST00000397404 GNAI1P63096 354 aa24.76■■□□□ 1.55
TSPAN4-204ENST00000397404 MTHFSDQ2M296 383 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-204ENST00000397404 CARD10Q9BWT7 1032 aa24.76■■□□□ 1.55
TSPAN4-204ENST00000397404 IFT57Q9NWB7 429 aa24.76■■□□□ 1.55
TSPAN4-204ENST00000397404 RGPD2P0DJD1 1756 aa24.75■■□□□ 1.55
TSPAN4-204ENST00000397404 EVA1CP58658 441 aa24.75■■□□□ 1.55
TSPAN4-204ENST00000397404 GNAT3A8MTJ3 354 aa24.74■■□□□ 1.55
TSPAN4-204ENST00000397404 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-204ENST00000397404 MAP3K5Q99683 1374 aa24.74■■□□□ 1.55
TSPAN4-204ENST00000397404 OVOS2A0A0G2JMS6 1433 aa24.73■■□□□ 1.55
TSPAN4-204ENST00000397404 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms