RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 MYRIPQ8NFW9 859 aa12.14□□□□□ -0.47
SCMH1-208ENST00000397171 JARID2Q92833 1246 aaPredicted RBP12.14□□□□□ -0.47
SCMH1-208ENST00000397171 RBM27Q9P2N5 1060 aaKnown RBP12.14□□□□□ -0.47
SCMH1-208ENST00000397171 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
SCMH1-208ENST00000397171 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
SCMH1-208ENST00000397171 ABCC3O15438 1527 aa12.13□□□□□ -0.47
SCMH1-208ENST00000397171 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
SCMH1-208ENST00000397171 CYP2E1P05181 493 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-208ENST00000397171 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
SCMH1-208ENST00000397171 GTPBP4Q9BZE4 634 aaKnown RBP12.12□□□□□ -0.47
SCMH1-208ENST00000397171 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 LRSAM1Q6UWE0 723 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 TSC1Q92574 1164 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 NUCB2P80303 420 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 CBX1P83916 185 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 PKP1Q13835 747 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 GGNBP2Q9H3C7 697 aa12.11□□□□□ -0.47
SCMH1-208ENST00000397171 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
SCMH1-208ENST00000397171 KIAA1210Q9ULL0 1709 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
SCMH1-208ENST00000397171 KIF20AO95235 890 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-208ENST00000397171 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
SCMH1-208ENST00000397171 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 IFT172Q9UG01 1749 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
SCMH1-208ENST00000397171 PDE4CQ08493 712 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 PRAM1Q96QH2 718 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.474e-7■■□□□ 13.8
SCMH1-208ENST00000397171 SYCE3A1L190 88 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
SCMH1-208ENST00000397171 ATP2B3Q16720 1220 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
SCMH1-208ENST00000397171 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
SCMH1-208ENST00000397171 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
SCMH1-208ENST00000397171 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
SCMH1-208ENST00000397171 FBLN1P23142 703 aa12.08□□□□□ -0.48
SCMH1-208ENST00000397171 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCMH1-208ENST00000397171 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
SCMH1-208ENST00000397171 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
SCMH1-208ENST00000397171 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
SCMH1-208ENST00000397171 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
SCMH1-208ENST00000397171 GTF2F1P35269 517 aaKnown RBP eCLIP12.08□□□□□ -0.483e-6■■■■□ 25.6
SCMH1-208ENST00000397171 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
SCMH1-208ENST00000397171 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
SCMH1-208ENST00000397171 NSFL1CQ9UNZ2 370 aaKnown RBP12.07□□□□□ -0.48
SCMH1-208ENST00000397171 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
SCMH1-208ENST00000397171 DNTTIP2Q5QJE6 756 aaKnown RBP12.07□□□□□ -0.48
SCMH1-208ENST00000397171 RNF214Q8ND24 703 aa12.07□□□□□ -0.48
SCMH1-208ENST00000397171 PPLO60437 1756 aa12.07□□□□□ -0.48
SCMH1-208ENST00000397171 DIP2CQ9Y2E4 1556 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 RABEP1Q15276 862 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SCMH1-208ENST00000397171 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 QRICH2Q9H0J4 1663 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
SCMH1-208ENST00000397171 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
SCMH1-208ENST00000397171 CAMSAP1Q5T5Y3 1602 aa12.05□□□□□ -0.48
SCMH1-208ENST00000397171 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
SCMH1-208ENST00000397171 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
SCMH1-208ENST00000397171 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
SCMH1-208ENST00000397171 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
SCMH1-208ENST00000397171 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
SCMH1-208ENST00000397171 PPIP5K1Q6PFW1 1433 aa12.04□□□□□ -0.48
SCMH1-208ENST00000397171 CDC45O75419 566 aa12.04□□□□□ -0.48
SCMH1-208ENST00000397171 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
SCMH1-208ENST00000397171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCMH1-208ENST00000397171 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
SCMH1-208ENST00000397171 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
SCMH1-208ENST00000397171 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
SCMH1-208ENST00000397171 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
SCMH1-208ENST00000397171 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
SCMH1-208ENST00000397171 CWC22Q9HCG8 908 aaKnown RBP12.03□□□□□ -0.48
SCMH1-208ENST00000397171 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
SCMH1-208ENST00000397171 A0A1W2PP64 1363 aa12.03□□□□□ -0.48
SCMH1-208ENST00000397171 NEXMIFQ5QGS0 1516 aa12.03□□□□□ -0.48
SCMH1-208ENST00000397171 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
SCMH1-208ENST00000397171 NOLC1Q14978 699 aaKnown RBP eCLIP12.02□□□□□ -0.48
SCMH1-208ENST00000397171 GCC1Q96CN9 775 aa12.02□□□□□ -0.48
SCMH1-208ENST00000397171 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.48
SCMH1-208ENST00000397171 CABP1Q9NZU7 370 aa12.02□□□□□ -0.48
SCMH1-208ENST00000397171 KIF3AQ9Y496 699 aa12.02□□□□□ -0.48
SCMH1-208ENST00000397171 ARHGEF40Q8TER5 1519 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms