RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NLRP6P59044 892 aa21.78■■□□□ 1.08
SEC13-206ENST00000397102 QRICH2Q9H0J4 1663 aa21.78■■□□□ 1.08
SEC13-206ENST00000397102 PIK3C2AO00443 1686 aa21.77■■□□□ 1.08
SEC13-206ENST00000397102 CABP2Q9NPB3 220 aa21.77■■□□□ 1.08
SEC13-206ENST00000397102 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.07
SEC13-206ENST00000397102 NBPF1Q3BBV0 1214 aa21.76■■□□□ 1.07
SEC13-206ENST00000397102 PTF1AQ7RTS3 328 aa21.76■■□□□ 1.07
SEC13-206ENST00000397102 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
SEC13-206ENST00000397102 WDR17Q8IZU2 1322 aa21.76■■□□□ 1.07
SEC13-206ENST00000397102 PROM2Q8N271 834 aa21.75■■□□□ 1.07
SEC13-206ENST00000397102 MARCH10Q8NA82 808 aaPredicted RBP21.75■■□□□ 1.07
SEC13-206ENST00000397102 PDGFDQ9GZP0 370 aaPredicted RBP21.75■■□□□ 1.07
SEC13-206ENST00000397102 ZBTB7AO95365 584 aa21.74■■□□□ 1.07
SEC13-206ENST00000397102 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
SEC13-206ENST00000397102 CPSF1Q10570 1443 aaKnown RBP21.73■■□□□ 1.07
SEC13-206ENST00000397102 PTGER2P43116 358 aa21.73■■□□□ 1.07
SEC13-206ENST00000397102 CABP1Q9NZU7 370 aa21.72■■□□□ 1.07
SEC13-206ENST00000397102 AXIN2Q9Y2T1 843 aa21.72■■□□□ 1.07
SEC13-206ENST00000397102 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
SEC13-206ENST00000397102 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
SEC13-206ENST00000397102 CHD4Q14839 1912 aa21.69■■□□□ 1.06
SEC13-206ENST00000397102 SLC15A2Q16348 729 aa21.69■■□□□ 1.06
SEC13-206ENST00000397102 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
SEC13-206ENST00000397102 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
SEC13-206ENST00000397102 ARHGEF25Q86VW2 580 aa21.68■■□□□ 1.06
SEC13-206ENST00000397102 CARD10Q9BWT7 1032 aa21.68■■□□□ 1.06
SEC13-206ENST00000397102 TRPM1Q7Z4N2 1603 aa21.67■■□□□ 1.06
SEC13-206ENST00000397102 KCNH5Q8NCM2 988 aa21.67■■□□□ 1.06
SEC13-206ENST00000397102 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
SEC13-206ENST00000397102 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
SEC13-206ENST00000397102 FHDC1Q9C0D6 1143 aaPredicted RBP21.66■■□□□ 1.06
SEC13-206ENST00000397102 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
SEC13-206ENST00000397102 ABCC6O95255 1503 aa21.65■■□□□ 1.06
SEC13-206ENST00000397102 EXOC5O00471 708 aa21.65■■□□□ 1.06
SEC13-206ENST00000397102 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
SEC13-206ENST00000397102 TNS2Q63HR2 1409 aa21.64■■□□□ 1.06
SEC13-206ENST00000397102 CCDC7Q96M83 1385 aa21.64■■□□□ 1.06
SEC13-206ENST00000397102 SGIP1Q9BQI5 828 aa21.64■■□□□ 1.05
SEC13-206ENST00000397102 NFAT5O94916 1531 aa21.64■■□□□ 1.05
SEC13-206ENST00000397102 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
SEC13-206ENST00000397102 EVC2Q86UK5 1308 aa21.63■■□□□ 1.05
SEC13-206ENST00000397102 PAPPAQ13219 1627 aa21.62■■□□□ 1.05
SEC13-206ENST00000397102 ZNF692Q9BU19 519 aaPredicted RBP21.62■■□□□ 1.05
SEC13-206ENST00000397102 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
SEC13-206ENST00000397102 SOX12O15370 315 aa21.59■■□□□ 1.05
SEC13-206ENST00000397102 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
SEC13-206ENST00000397102 BTAF1O14981 1849 aa21.57■■□□□ 1.04
SEC13-206ENST00000397102 ARXQ96QS3 562 aa21.57■■□□□ 1.04
SEC13-206ENST00000397102 MON2Q7Z3U7 1717 aa21.56■■□□□ 1.04
SEC13-206ENST00000397102 UTRNP46939 3433 aa21.56■■□□□ 1.04
SEC13-206ENST00000397102 USP54Q70EL1 1684 aa21.56■■□□□ 1.04
SEC13-206ENST00000397102 ACSBG1Q96GR2 724 aa21.55■■□□□ 1.04
SEC13-206ENST00000397102 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
SEC13-206ENST00000397102 C1QTNF8P60827 252 aa21.54■■□□□ 1.04
SEC13-206ENST00000397102 KTN1Q86UP2 1357 aaKnown RBP21.53■■□□□ 1.04
SEC13-206ENST00000397102 QSER1Q2KHR3 1735 aa21.53■■□□□ 1.04
SEC13-206ENST00000397102 LTN1O94822 1766 aa21.53■■□□□ 1.04
SEC13-206ENST00000397102 ERBB3P21860 1342 aa21.53■■□□□ 1.04
SEC13-206ENST00000397102 KAT6BQ8WYB5 2073 aa21.51■■□□□ 1.03
SEC13-206ENST00000397102 USP31Q70CQ4 1352 aa21.5■■□□□ 1.03
SEC13-206ENST00000397102 COL24A1Q17RW2 1714 aa21.5■■□□□ 1.03
SEC13-206ENST00000397102 IL2RBP14784 551 aa21.5■■□□□ 1.03
SEC13-206ENST00000397102 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
SEC13-206ENST00000397102 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
SEC13-206ENST00000397102 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
SEC13-206ENST00000397102 GPR162Q16538 588 aa21.47■■□□□ 1.03
SEC13-206ENST00000397102 LRRC4BQ9NT99 713 aa21.47■■□□□ 1.03
SEC13-206ENST00000397102 SLC16A10Q8TF71 515 aa21.46■■□□□ 1.03
SEC13-206ENST00000397102 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
SEC13-206ENST00000397102 AKT1S1Q96B36 256 aa21.45■■□□□ 1.02
SEC13-206ENST00000397102 TUBGCP6Q96RT7 1819 aa21.44■■□□□ 1.02
SEC13-206ENST00000397102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
SEC13-206ENST00000397102 POLD1P28340 1107 aa21.43■■□□□ 1.02
SEC13-206ENST00000397102 SLC27A3Q5K4L6 730 aa21.43■■□□□ 1.02
SEC13-206ENST00000397102 ANKRD24Q8TF21 1146 aa21.43■■□□□ 1.02
SEC13-206ENST00000397102 FAM208AQ9UK61 1670 aaKnown RBP21.43■■□□□ 1.02
SEC13-206ENST00000397102 NME9Q86XW9 330 aa21.42■■□□□ 1.02
SEC13-206ENST00000397102 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
SEC13-206ENST00000397102 SBNO2Q9Y2G9 1366 aa21.41■■□□□ 1.02
SEC13-206ENST00000397102 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
SEC13-206ENST00000397102 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
SEC13-206ENST00000397102 PNPLA7Q6ZV29 1317 aa21.4■■□□□ 1.02
SEC13-206ENST00000397102 LY75O60449 1722 aa21.4■■□□□ 1.02
SEC13-206ENST00000397102 SHANK3Q9BYB0 1731 aa21.39■■□□□ 1.01
SEC13-206ENST00000397102 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
SEC13-206ENST00000397102 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
SEC13-206ENST00000397102 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
SEC13-206ENST00000397102 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
SEC13-206ENST00000397102 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
SEC13-206ENST00000397102 HDGFL2Q7Z4V5 671 aaPredicted RBP21.35■■□□□ 1.01
SEC13-206ENST00000397102 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
SEC13-206ENST00000397102 ANKRD36BQ8N2N9 1353 aa21.34■■□□□ 1.01
SEC13-206ENST00000397102 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
SEC13-206ENST00000397102 IP6K1Q92551 441 aa21.33■■□□□ 1.01
SEC13-206ENST00000397102 SIN3AQ96ST3 1273 aa21.32■■□□□ 1
SEC13-206ENST00000397102 NSD2O96028 1365 aa21.32■■□□□ 1
SEC13-206ENST00000397102 KCNQ4P56696 695 aa21.31■■□□□ 1
SEC13-206ENST00000397102 IFFO2Q5TF58 517 aa21.31■■□□□ 1
SEC13-206ENST00000397102 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
SEC13-206ENST00000397102 GRIN3BO60391 1043 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms