RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 NFAT5O94916 1531 aa26.63■■□□□ 1.85
MCF2L-207ENST00000397024 RGPD5Q99666 1765 aa26.63■■□□□ 1.85
MCF2L-207ENST00000397024 USP31Q70CQ4 1352 aa26.62■■□□□ 1.85
MCF2L-207ENST00000397024 WDR17Q8IZU2 1322 aa26.62■■□□□ 1.85
MCF2L-207ENST00000397024 HDGFL2Q7Z4V5 671 aaPredicted RBP26.61■■□□□ 1.85
MCF2L-207ENST00000397024 DISP2A7MBM2 1401 aa26.6■■□□□ 1.85
MCF2L-207ENST00000397024 EZH2Q15910 746 aaKnown RBP26.6■■□□□ 1.85
MCF2L-207ENST00000397024 PARP4Q9UKK3 1724 aaKnown RBP26.59■■□□□ 1.85
MCF2L-207ENST00000397024 PSDA5PKW4 1024 aaPredicted RBP26.59■■□□□ 1.85
MCF2L-207ENST00000397024 CAMKK2Q96RR4 588 aa26.59■■□□□ 1.85
MCF2L-207ENST00000397024 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
MCF2L-207ENST00000397024 A0A1W2PP64 1363 aa26.58■■□□□ 1.85
MCF2L-207ENST00000397024 APBA3O96018 575 aa26.58■■□□□ 1.85
MCF2L-207ENST00000397024 EDC4Q6P2E9 1401 aaKnown RBP26.56■■□□□ 1.84
MCF2L-207ENST00000397024 CSB-PGBD3P0DP91 1061 aa26.55■■□□□ 1.84
MCF2L-207ENST00000397024 CARD10Q9BWT7 1032 aa26.55■■□□□ 1.84
MCF2L-207ENST00000397024 USP54Q70EL1 1684 aa26.54■■□□□ 1.84
MCF2L-207ENST00000397024 DDB1Q16531 1140 aa26.53■■□□□ 1.84
MCF2L-207ENST00000397024 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
MCF2L-207ENST00000397024 LRRC37A3O60309 1634 aa26.51■■□□□ 1.83
MCF2L-207ENST00000397024 USP47Q96K76 1375 aa26.5■■□□□ 1.83
MCF2L-207ENST00000397024 R3HDM1Q15032 1099 aaKnown RBP26.5■■□□□ 1.83
MCF2L-207ENST00000397024 MARCH10Q8NA82 808 aaPredicted RBP26.5■■□□□ 1.83
MCF2L-207ENST00000397024 PEAK1Q9H792 1746 aa26.5■■□□□ 1.83
MCF2L-207ENST00000397024 SLC24A1O60721 1099 aa26.49■■□□□ 1.83
MCF2L-207ENST00000397024 OVOS2A0A0J9YW53 1432 aa26.48■■□□□ 1.83
MCF2L-207ENST00000397024 OVOS2Q6IE36 1432 aa26.48■■□□□ 1.83
MCF2L-207ENST00000397024 PTF1AQ7RTS3 328 aa26.48■■□□□ 1.83
MCF2L-207ENST00000397024 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
MCF2L-207ENST00000397024 NINLQ9Y2I6 1382 aa26.47■■□□□ 1.83
MCF2L-207ENST00000397024 WNK3Q9BYP7 1800 aa26.47■■□□□ 1.83
MCF2L-207ENST00000397024 ABCC6O95255 1503 aa26.47■■□□□ 1.83
MCF2L-207ENST00000397024 OVOS2A0A0G2JMS6 1433 aa26.47■■□□□ 1.83
MCF2L-207ENST00000397024 LTN1O94822 1766 aa26.46■■□□□ 1.83
MCF2L-207ENST00000397024 ERBB3P21860 1342 aa26.45■■□□□ 1.83
MCF2L-207ENST00000397024 C11orf95C9JLR9 678 aaPredicted RBP26.45■■□□□ 1.82
MCF2L-207ENST00000397024 TMF1P82094 1093 aa26.45■■□□□ 1.82
MCF2L-207ENST00000397024 PARD3Q8TEW0 1356 aa26.45■■□□□ 1.82
MCF2L-207ENST00000397024 FBLN1P23142 703 aa26.44■■□□□ 1.82
MCF2L-207ENST00000397024 NLRP2Q9NX02 1062 aa26.44■■□□□ 1.82
MCF2L-207ENST00000397024 CCDC7Q96M83 1385 aa26.44■■□□□ 1.82
MCF2L-207ENST00000397024 SBF2Q86WG5 1849 aa26.44■■□□□ 1.82
MCF2L-207ENST00000397024 EXOC5O00471 708 aa26.43■■□□□ 1.82
MCF2L-207ENST00000397024 ANKRD24Q8TF21 1146 aa26.43■■□□□ 1.82
MCF2L-207ENST00000397024 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
MCF2L-207ENST00000397024 ANKRD36BQ8N2N9 1353 aa26.41■■□□□ 1.82
MCF2L-207ENST00000397024 RREB1Q92766 1687 aa26.41■■□□□ 1.82
MCF2L-207ENST00000397024 IP6K1Q92551 441 aa26.4■■□□□ 1.82
MCF2L-207ENST00000397024 COG3Q96JB2 828 aa26.4■■□□□ 1.82
MCF2L-207ENST00000397024 BCL11BQ9C0K0 894 aaPredicted RBP26.4■■□□□ 1.82
MCF2L-207ENST00000397024 CLSPNQ9HAW4 1339 aa26.39■■□□□ 1.82
MCF2L-207ENST00000397024 NUP188Q5SRE5 1749 aa26.37■■□□□ 1.81
MCF2L-207ENST00000397024 LRP5O75197 1615 aa26.37■■□□□ 1.81
MCF2L-207ENST00000397024 FYB1O15117 783 aa26.37■■□□□ 1.81
MCF2L-207ENST00000397024 BCL9O00512 1426 aa26.37■■□□□ 1.81
MCF2L-207ENST00000397024 MAP3K19Q56UN5 1328 aa26.37■■□□□ 1.81
MCF2L-207ENST00000397024 PLSCR1O15162 318 aa26.36■■□□□ 1.81
MCF2L-207ENST00000397024 LTV1Q96GA3 475 aaPredicted RBP26.35■■□□□ 1.81
MCF2L-207ENST00000397024 GGNBP2Q9H3C7 697 aa26.35■■□□□ 1.81
MCF2L-207ENST00000397024 IL2RBP14784 551 aa26.34■■□□□ 1.81
MCF2L-207ENST00000397024 PROM2Q8N271 834 aa26.34■■□□□ 1.81
MCF2L-207ENST00000397024 TNS2Q63HR2 1409 aa26.33■■□□□ 1.81
MCF2L-207ENST00000397024 NBPF14Q5TI25 921 aa26.33■■□□□ 1.81
MCF2L-207ENST00000397024 KCNQ2O43526 872 aa26.32■■□□□ 1.8
MCF2L-207ENST00000397024 HOXC9P31274 260 aa26.32■■□□□ 1.8
MCF2L-207ENST00000397024 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
MCF2L-207ENST00000397024 AMPHP49418 695 aa26.31■■□□□ 1.8
MCF2L-207ENST00000397024 CARD14Q9BXL6 1004 aa26.31■■□□□ 1.8
MCF2L-207ENST00000397024 RRS1Q15050 365 aaKnown RBP26.3■■□□□ 1.8
MCF2L-207ENST00000397024 ACSBG1Q96GR2 724 aa26.28■■□□□ 1.8
MCF2L-207ENST00000397024 RGPD3A6NKT7 1758 aaPredicted RBP26.26■■□□□ 1.79
MCF2L-207ENST00000397024 RGPD4Q7Z3J3 1758 aa26.26■■□□□ 1.79
MCF2L-207ENST00000397024 ANO8Q9HCE9 1232 aaPredicted RBP26.26■■□□□ 1.79
MCF2L-207ENST00000397024 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
MCF2L-207ENST00000397024 RGPD2P0DJD1 1756 aa26.24■■□□□ 1.79
MCF2L-207ENST00000397024 MYOM1P52179 1685 aa26.24■■□□□ 1.79
MCF2L-207ENST00000397024 TXNRD1Q16881 649 aa26.23■■□□□ 1.79
MCF2L-207ENST00000397024 DDX54Q8TDD1 881 aaKnown RBP26.22■■□□□ 1.79
MCF2L-207ENST00000397024 KAT6BQ8WYB5 2073 aa26.21■■□□□ 1.79
MCF2L-207ENST00000397024 NBPF6Q5VWK0 638 aa26.21■■□□□ 1.79
MCF2L-207ENST00000397024 NBPF4Q96M43 638 aa26.21■■□□□ 1.79
MCF2L-207ENST00000397024 NHSQ6T4R5 1651 aa26.2■■□□□ 1.78
MCF2L-207ENST00000397024 FAM208AQ9UK61 1670 aaKnown RBP26.2■■□□□ 1.78
MCF2L-207ENST00000397024 NSD3Q9BZ95 1437 aa26.2■■□□□ 1.78
MCF2L-207ENST00000397024 RTL1A6NKG5 1358 aa26.2■■□□□ 1.78
MCF2L-207ENST00000397024 KIF20BQ96Q89 1820 aa26.19■■□□□ 1.78
MCF2L-207ENST00000397024 HSP90AB2PQ58FF8 381 aa26.19■■□□□ 1.78
MCF2L-207ENST00000397024 PDGFDQ9GZP0 370 aaPredicted RBP26.19■■□□□ 1.78
MCF2L-207ENST00000397024 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
MCF2L-207ENST00000397024 USHBP1Q8N6Y0 703 aa26.17■■□□□ 1.78
MCF2L-207ENST00000397024 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
MCF2L-207ENST00000397024 ZCRB1Q8TBF4 217 aaKnown RBP26.15■■□□□ 1.78
MCF2L-207ENST00000397024 MEGF6O75095 1541 aa26.14■■□□□ 1.78
MCF2L-207ENST00000397024 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.78
MCF2L-207ENST00000397024 EMILIN1Q9Y6C2 1016 aa26.14■■□□□ 1.78
MCF2L-207ENST00000397024 INSRP06213 1382 aa26.13■■□□□ 1.77
MCF2L-207ENST00000397024 SPON1Q9HCB6 807 aa26.13■■□□□ 1.77
MCF2L-207ENST00000397024 BTAF1O14981 1849 aa26.13■■□□□ 1.77
MCF2L-207ENST00000397024 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
MCF2L-207ENST00000397024 FLT4P35916 1363 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms