RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
SCFD1-202ENST00000396629 ZBTB7AO95365 584 aa12.37□□□□□ -0.43
SCFD1-202ENST00000396629 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
SCFD1-202ENST00000396629 MARCH10Q8NA82 808 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-202ENST00000396629 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
SCFD1-202ENST00000396629 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-202ENST00000396629 SYT17Q9BSW7 474 aa12.35□□□□□ -0.43
SCFD1-202ENST00000396629 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
SCFD1-202ENST00000396629 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
SCFD1-202ENST00000396629 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-202ENST00000396629 STK32BQ9NY57 414 aa12.34□□□□□ -0.43
SCFD1-202ENST00000396629 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
SCFD1-202ENST00000396629 SLC15A2Q16348 729 aa12.33□□□□□ -0.43
SCFD1-202ENST00000396629 TXNRD1Q16881 649 aa12.33□□□□□ -0.43
SCFD1-202ENST00000396629 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.43
SCFD1-202ENST00000396629 USP6P35125 1406 aa12.33□□□□□ -0.44
SCFD1-202ENST00000396629 PIK3C2AO00443 1686 aa12.33□□□□□ -0.44
SCFD1-202ENST00000396629 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
SCFD1-202ENST00000396629 NLRP6P59044 892 aa12.33□□□□□ -0.44
SCFD1-202ENST00000396629 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
SCFD1-202ENST00000396629 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
SCFD1-202ENST00000396629 C1QTNF8P60827 252 aa12.32□□□□□ -0.44
SCFD1-202ENST00000396629 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
SCFD1-202ENST00000396629 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
SCFD1-202ENST00000396629 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
SCFD1-202ENST00000396629 SENP3-EIF4A1A0A087X0R7 540 aa12.31□□□□□ -0.44
SCFD1-202ENST00000396629 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
SCFD1-202ENST00000396629 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
SCFD1-202ENST00000396629 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
SCFD1-202ENST00000396629 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 NBPF1Q3BBV0 1214 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 ARHGEF25Q86VW2 580 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 CABP1Q9NZU7 370 aa12.3□□□□□ -0.44
SCFD1-202ENST00000396629 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-202ENST00000396629 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
SCFD1-202ENST00000396629 EXOC5O00471 708 aa12.28□□□□□ -0.44
SCFD1-202ENST00000396629 ADRA2BP18089 450 aa12.28□□□□□ -0.44
SCFD1-202ENST00000396629 ARXQ96QS3 562 aa12.28□□□□□ -0.44
SCFD1-202ENST00000396629 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
SCFD1-202ENST00000396629 CCDC7Q96M83 1385 aa12.27□□□□□ -0.44
SCFD1-202ENST00000396629 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
SCFD1-202ENST00000396629 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.45
SCFD1-202ENST00000396629 ABCC6O95255 1503 aa12.27□□□□□ -0.45
SCFD1-202ENST00000396629 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
SCFD1-202ENST00000396629 BTAF1O14981 1849 aa12.26□□□□□ -0.45
SCFD1-202ENST00000396629 NFAT5O94916 1531 aa12.26□□□□□ -0.45
SCFD1-202ENST00000396629 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
SCFD1-202ENST00000396629 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
SCFD1-202ENST00000396629 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
SCFD1-202ENST00000396629 MSH5O43196 834 aa12.25□□□□□ -0.45
SCFD1-202ENST00000396629 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
SCFD1-202ENST00000396629 ACSBG1Q96GR2 724 aa12.23□□□□□ -0.45
SCFD1-202ENST00000396629 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
SCFD1-202ENST00000396629 UTRNP46939 3433 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 GPR162Q16538 588 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
SCFD1-202ENST00000396629 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
SCFD1-202ENST00000396629 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
SCFD1-202ENST00000396629 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
SCFD1-202ENST00000396629 GIGYF1O75420 1035 aaPredicted RBP12.21□□□□□ -0.46
SCFD1-202ENST00000396629 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.46
SCFD1-202ENST00000396629 SOX12O15370 315 aa12.2□□□□□ -0.46
SCFD1-202ENST00000396629 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
SCFD1-202ENST00000396629 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
SCFD1-202ENST00000396629 LTN1O94822 1766 aa12.2□□□□□ -0.46
SCFD1-202ENST00000396629 ERBB3P21860 1342 aa12.18□□□□□ -0.46
SCFD1-202ENST00000396629 IL2RBP14784 551 aa12.18□□□□□ -0.46
SCFD1-202ENST00000396629 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
SCFD1-202ENST00000396629 POLD1P28340 1107 aa12.17□□□□□ -0.46
SCFD1-202ENST00000396629 SLC27A3Q5K4L6 730 aa12.17□□□□□ -0.46
SCFD1-202ENST00000396629 NLRP2Q9NX02 1062 aa12.17□□□□□ -0.46
SCFD1-202ENST00000396629 LY75O60449 1722 aa12.17□□□□□ -0.46
SCFD1-202ENST00000396629 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
SCFD1-202ENST00000396629 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
SCFD1-202ENST00000396629 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
SCFD1-202ENST00000396629 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.47
SCFD1-202ENST00000396629 KLHL34Q8N239 644 aa12.15□□□□□ -0.47
SCFD1-202ENST00000396629 FAM208AQ9UK61 1670 aaKnown RBP12.14□□□□□ -0.47
SCFD1-202ENST00000396629 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
SCFD1-202ENST00000396629 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
SCFD1-202ENST00000396629 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
SCFD1-202ENST00000396629 CD163L1Q9NR16 1453 aa12.12□□□□□ -0.47
SCFD1-202ENST00000396629 YBX3P16989 372 aaKnown RBP eCLIP12.12□□□□□ -0.475e-7■■■□□ 14.6
SCFD1-202ENST00000396629 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
SCFD1-202ENST00000396629 SBNO2Q9Y2G9 1366 aa12.11□□□□□ -0.47
SCFD1-202ENST00000396629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.472e-7■■■■□ 19.6
SCFD1-202ENST00000396629 NME9Q86XW9 330 aa12.11□□□□□ -0.47
SCFD1-202ENST00000396629 L3MBTL2Q969R5 705 aa12.11□□□□□ -0.47
SCFD1-202ENST00000396629 NSD2O96028 1365 aa12.1□□□□□ -0.47
SCFD1-202ENST00000396629 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
SCFD1-202ENST00000396629 KCNQ4P56696 695 aa12.1□□□□□ -0.47
SCFD1-202ENST00000396629 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
SCFD1-202ENST00000396629 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
SCFD1-202ENST00000396629 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
SCFD1-202ENST00000396629 IP6K1Q92551 441 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms