RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
COL4A4-201ENST00000396625 CCDC175P0C221 793 aa12.14□□□□□ -0.47
COL4A4-201ENST00000396625 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
COL4A4-201ENST00000396625 RIPK4P57078 832 aa12.13□□□□□ -0.47
COL4A4-201ENST00000396625 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
COL4A4-201ENST00000396625 KIF2AO00139 706 aaPredicted RBP12.13□□□□□ -0.47
COL4A4-201ENST00000396625 TRIM22Q8IYM9 498 aa12.13□□□□□ -0.47
COL4A4-201ENST00000396625 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
COL4A4-201ENST00000396625 CBX1P83916 185 aa12.13□□□□□ -0.47
COL4A4-201ENST00000396625 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
COL4A4-201ENST00000396625 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
COL4A4-201ENST00000396625 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
COL4A4-201ENST00000396625 PANK1Q8TE04 598 aa12.12□□□□□ -0.47
COL4A4-201ENST00000396625 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
COL4A4-201ENST00000396625 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
COL4A4-201ENST00000396625 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
COL4A4-201ENST00000396625 CLGNO14967 610 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 KRT85P78386 507 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 SEPT6Q14141 434 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
COL4A4-201ENST00000396625 WIZO95785 1651 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 ZWINTO95229 277 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 CETN2P41208 172 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
COL4A4-201ENST00000396625 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
COL4A4-201ENST00000396625 ESPNB1AK53 854 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 SPA17Q15506 151 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 KIF5CO60282 957 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 TSPYL4Q9UJ04 414 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
COL4A4-201ENST00000396625 DAAM2Q86T65 1068 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 STK3Q13188 491 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
COL4A4-201ENST00000396625 MNAT1P51948 309 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 C6orf163Q5TEZ5 329 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 SPECC1LQ69YQ0 1117 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 SPATA32Q96LK8 384 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 APAF1O14727 1248 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
COL4A4-201ENST00000396625 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 TRERF1Q96PN7 1200 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
COL4A4-201ENST00000396625 RAI14Q9P0K7 980 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
COL4A4-201ENST00000396625 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A4-201ENST00000396625 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 CDKL5O76039 1030 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 TMCO5BA8MYB1 307 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
COL4A4-201ENST00000396625 WASHC2AQ641Q2 1341 aa12.08□□□□□ -0.48
COL4A4-201ENST00000396625 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 VPS36Q86VN1 386 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 NAP1L3Q99457 506 aaPredicted RBP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 CCDC160A6NGH7 325 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 FERP16591 822 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 GNAI1P63096 354 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 TIGD1Q96MW7 591 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 DNAI2Q9GZS0 605 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 FILIP1Q7Z7B0 1213 aa12.07□□□□□ -0.48
COL4A4-201ENST00000396625 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
COL4A4-201ENST00000396625 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
COL4A4-201ENST00000396625 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
COL4A4-201ENST00000396625 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
COL4A4-201ENST00000396625 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
COL4A4-201ENST00000396625 COMMD10Q9Y6G5 202 aa12.06□□□□□ -0.48
COL4A4-201ENST00000396625 SYCE3A1L190 88 aa12.05□□□□□ -0.48
COL4A4-201ENST00000396625 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
COL4A4-201ENST00000396625 ZSCAN30Q86W11 494 aa12.05□□□□□ -0.48
COL4A4-201ENST00000396625 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
COL4A4-201ENST00000396625 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
COL4A4-201ENST00000396625 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
COL4A4-201ENST00000396625 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms