RNA–Protein interactions for RNA: ENST00000396535.7

SHC4-202, Transcript of SHC adaptor protein 4, humanhuman

TSL 1 (best) BASIC

Gene SHC4, Length 2,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-202ENST00000396535 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 ZDHHC9Q9Y397 364 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
SHC4-202ENST00000396535 PRG4Q92954 1404 aaPredicted RBP8.66□□□□□ -1.02
SHC4-202ENST00000396535 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 RIOK3O14730 519 aaKnown RBP8.66□□□□□ -1.02
SHC4-202ENST00000396535 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 CHAMP1Q96JM3 812 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 TTC12Q9H892 705 aaPredicted RBP8.66□□□□□ -1.02
SHC4-202ENST00000396535 SHPRHQ149N8 1683 aa8.66□□□□□ -1.02
SHC4-202ENST00000396535 TROQ12816 1431 aaPredicted RBP8.65□□□□□ -1.02
SHC4-202ENST00000396535 IQGAP1P46940 1657 aa8.65□□□□□ -1.02
SHC4-202ENST00000396535 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
SHC4-202ENST00000396535 TSPY26PQ9H489 355 aa8.65□□□□□ -1.02
SHC4-202ENST00000396535 DDX19BQ9UMR2 479 aa8.65□□□□□ -1.02
SHC4-202ENST00000396535 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
SHC4-202ENST00000396535 TRIM27P14373 513 aa8.65□□□□□ -1.03
SHC4-202ENST00000396535 LMOD2Q6P5Q4 547 aa8.65□□□□□ -1.03
SHC4-202ENST00000396535 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
SHC4-202ENST00000396535 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
SHC4-202ENST00000396535 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 MBD3O95983 291 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 RABEP1Q15276 862 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 TCP11L2Q8N4U5 519 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 CWC22Q9HCG8 908 aaKnown RBP8.64□□□□□ -1.03
SHC4-202ENST00000396535 CTNNA3Q9UI47 895 aa8.64□□□□□ -1.03
SHC4-202ENST00000396535 ZGPATQ8N5A5 531 aaKnown RBP8.63□□□□□ -1.03
SHC4-202ENST00000396535 RUNDC1Q96C34 613 aa8.63□□□□□ -1.03
SHC4-202ENST00000396535 DIAPH3Q9NSV4 1193 aa8.63□□□□□ -1.03
SHC4-202ENST00000396535 ZBTB40Q9NUA8 1239 aa8.63□□□□□ -1.03
SHC4-202ENST00000396535 CCDC66A2RUB6 948 aa8.63□□□□□ -1.03
SHC4-202ENST00000396535 NCBP1Q09161 790 aaKnown RBP8.63□□□□□ -1.03
SHC4-202ENST00000396535 RAPGEF6Q8TEU7 1601 aa8.63□□□□□ -1.03
SHC4-202ENST00000396535 TULP2O00295 520 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 CAPN2P17655 700 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 TIGD1Q96MW7 591 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 USP25Q9UHP3 1055 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 DDX41Q9UJV9 622 aaKnown RBP8.62□□□□□ -1.03
SHC4-202ENST00000396535 TERF2Q15554 542 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
SHC4-202ENST00000396535 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 ATF7IPQ6VMQ6 1270 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 KIAA1524Q8TCG1 905 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 ADCY5O95622 1261 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 CHAF1AQ13111 956 aaPredicted RBP8.61□□□□□ -1.03
SHC4-202ENST00000396535 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
SHC4-202ENST00000396535 SMC4Q9NTJ3 1288 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 CEP152O94986 1710 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 FAM184AQ8NB25 1140 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 ZFP91Q96JP5 570 aaPredicted RBP8.61□□□□□ -1.03
SHC4-202ENST00000396535 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
SHC4-202ENST00000396535 MORC2Q9Y6X9 1032 aaPredicted RBP8.61□□□□□ -1.03
SHC4-202ENST00000396535 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 CDC45O75419 566 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
SHC4-202ENST00000396535 IRX3P78415 501 aaPredicted RBP8.6□□□□□ -1.03
SHC4-202ENST00000396535 SYCP1Q15431 976 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 PYCARDQ9ULZ3 195 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 REREQ9P2R6 1566 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 KDM5AP29375 1690 aaKnown RBP8.6□□□□□ -1.03
SHC4-202ENST00000396535 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
SHC4-202ENST00000396535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
SHC4-202ENST00000396535 TEX2Q8IWB9 1127 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 CARD14Q9BXL6 1004 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 KCNF1Q9H3M0 494 aa8.6□□□□□ -1.03
SHC4-202ENST00000396535 PLB1Q6P1J6 1458 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 NOS1P29475 1434 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 SSH1Q8WYL5 1049 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 ANKRD45Q5TZF3 282 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 OSCARQ8IYS5 282 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
SHC4-202ENST00000396535 SYAP1Q96A49 352 aaPredicted RBP8.59□□□□□ -1.03
SHC4-202ENST00000396535 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
SHC4-202ENST00000396535 SCAF11Q99590 1463 aaKnown RBP8.59□□□□□ -1.03
SHC4-202ENST00000396535 YEATS2Q9ULM3 1422 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 TSR2Q969E8 191 aaKnown RBP8.58□□□□□ -1.04
SHC4-202ENST00000396535 CALCOCO1Q9P1Z2 691 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 PPIP5K1Q6PFW1 1433 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 STK25O00506 426 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 PHF14O94880 888 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
SHC4-202ENST00000396535 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
SHC4-202ENST00000396535 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
SHC4-202ENST00000396535 TRIM6-TRIM34B2RNG4 842 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 GSPT1P15170 499 aaKnown RBP8.57□□□□□ -1.04
SHC4-202ENST00000396535 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
SHC4-202ENST00000396535 CERS3Q8IU89 383 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 UHRF1BP1LA0JNW5 1464 aa8.57□□□□□ -1.04
SHC4-202ENST00000396535 UNC13BO14795 1591 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms