RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KIDINS220Q9ULH0 1771 aa10.41□□□□□ -0.74
NDE1-202ENST00000396355 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
NDE1-202ENST00000396355 ASXL1Q8IXJ9 1541 aa10.4□□□□□ -0.74
NDE1-202ENST00000396355 FAM193AP78312 1265 aa10.4□□□□□ -0.74
NDE1-202ENST00000396355 DRC7Q8IY82 874 aa10.4□□□□□ -0.74
NDE1-202ENST00000396355 PRDM4Q9UKN5 801 aa10.4□□□□□ -0.74
NDE1-202ENST00000396355 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
NDE1-202ENST00000396355 PDCL2Q8N4E4 241 aa10.4□□□□□ -0.74
NDE1-202ENST00000396355 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
NDE1-202ENST00000396355 CFAP65Q6ZU64 1925 aaKnown RBP10.39□□□□□ -0.75
NDE1-202ENST00000396355 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 SOX12O15370 315 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 EFCAB6Q5THR3 1501 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 GOLGA6L6A8MZA4 724 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 TAF3Q5VWG9 929 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 CHMP5Q9NZZ3 219 aa10.39□□□□□ -0.75
NDE1-202ENST00000396355 KIF1BO60333 1816 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 NEURL4Q96JN8 1562 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 LETM1O95202 739 aaPredicted RBP10.38□□□□□ -0.75
NDE1-202ENST00000396355 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 C19orf44Q9H6X5 657 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 AMOTL2Q9Y2J4 779 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
NDE1-202ENST00000396355 CPS1P31327 1500 aa10.37□□□□□ -0.75
NDE1-202ENST00000396355 PIK3C2GO75747 1445 aa10.37□□□□□ -0.75
NDE1-202ENST00000396355 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
NDE1-202ENST00000396355 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
NDE1-202ENST00000396355 MYOM2P54296 1465 aa10.37□□□□□ -0.75
NDE1-202ENST00000396355 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
NDE1-202ENST00000396355 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
NDE1-202ENST00000396355 CCDC94Q9BW85 323 aaPredicted RBP10.37□□□□□ -0.75
NDE1-202ENST00000396355 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
NDE1-202ENST00000396355 STK26Q9P289 416 aa10.36□□□□□ -0.75
NDE1-202ENST00000396355 MYO3AQ8NEV4 1616 aa10.36□□□□□ -0.75
NDE1-202ENST00000396355 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
NDE1-202ENST00000396355 STRCQ7RTU9 1775 aa10.36□□□□□ -0.75
NDE1-202ENST00000396355 NEUROD2Q15784 382 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 TMEM2Q9UHN6 1383 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 SIGLEC1Q9BZZ2 1709 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 KIF20AO95235 890 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 LRRC59Q96AG4 307 aaKnown RBP10.35□□□□□ -0.75
NDE1-202ENST00000396355 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NDE1-202ENST00000396355 JCADQ9P266 1359 aa10.34□□□□□ -0.75
NDE1-202ENST00000396355 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
NDE1-202ENST00000396355 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
NDE1-202ENST00000396355 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
NDE1-202ENST00000396355 U2SURPO15042 1029 aaKnown RBP10.34□□□□□ -0.75
NDE1-202ENST00000396355 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
NDE1-202ENST00000396355 DMTNQ08495 405 aa10.34□□□□□ -0.75
NDE1-202ENST00000396355 GTPBP4Q9BZE4 634 aaKnown RBP10.34□□□□□ -0.75
NDE1-202ENST00000396355 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
NDE1-202ENST00000396355 DYNC1I1O14576 645 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 SHPRHQ149N8 1683 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 OFD1O75665 1012 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
NDE1-202ENST00000396355 SASS6Q6UVJ0 657 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 EIF3AQ14152 1382 aaKnown RBP10.33□□□□□ -0.76
NDE1-202ENST00000396355 PPLO60437 1756 aa10.33□□□□□ -0.76
NDE1-202ENST00000396355 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
NDE1-202ENST00000396355 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
NDE1-202ENST00000396355 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
NDE1-202ENST00000396355 DDX17Q92841 729 aaKnown RBP10.32□□□□□ -0.76
NDE1-202ENST00000396355 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
NDE1-202ENST00000396355 AFF2P51816 1311 aa10.32□□□□□ -0.76
NDE1-202ENST00000396355 NOS1P29475 1434 aa10.32□□□□□ -0.76
NDE1-202ENST00000396355 LMTK2Q8IWU2 1503 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 GOLGA6L1Q8N7Z2 621 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 QRICH2Q9H0J4 1663 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
NDE1-202ENST00000396355 ADGRB1O14514 1584 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 LMOD3Q0VAK6 560 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
NDE1-202ENST00000396355 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
NDE1-202ENST00000396355 TRMT2AQ8IZ69 625 aaKnown RBP10.31□□□□□ -0.76
NDE1-202ENST00000396355 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
NDE1-202ENST00000396355 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
NDE1-202ENST00000396355 SLFN5Q08AF3 891 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 BANK1Q8NDB2 785 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 REREQ9P2R6 1566 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 APAF1O14727 1248 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 RGS17Q9UGC6 210 aaPredicted RBP10.3□□□□□ -0.76
NDE1-202ENST00000396355 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
NDE1-202ENST00000396355 SKOR2Q2VWA4 1001 aaPredicted RBP10.29□□□□□ -0.76
NDE1-202ENST00000396355 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
NDE1-202ENST00000396355 TMEM51Q9NW97 253 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms