RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
CCHCR1-203ENST00000396268 ATP7BP35670 1465 aa17.74■□□□□ 0.43
CCHCR1-203ENST00000396268 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 TRIM27P14373 513 aa17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-203ENST00000396268 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
CCHCR1-203ENST00000396268 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-203ENST00000396268 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 NSD2O96028 1365 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 ZNF142P52746 1687 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 ACEP12821 1306 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 RIPK4P57078 832 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCHCR1-203ENST00000396268 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-203ENST00000396268 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 HSPA2P54652 639 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 SOX12O15370 315 aa17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 NPHP4O75161 1426 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-203ENST00000396268 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
CCHCR1-203ENST00000396268 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-203ENST00000396268 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
CCHCR1-203ENST00000396268 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 MCM4P33991 863 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 PLEKHG3A1L390 1219 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 PKNOX2Q96KN3 472 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
CCHCR1-203ENST00000396268 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-203ENST00000396268 NGDNQ8NEJ9 315 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 COG3Q96JB2 828 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 IL16Q14005 1332 aa17.58■□□□□ 0.41
CCHCR1-203ENST00000396268 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-203ENST00000396268 USP6P35125 1406 aa17.58■□□□□ 0.4
CCHCR1-203ENST00000396268 NALCNQ8IZF0 1738 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
CCHCR1-203ENST00000396268 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 TRAK2O60296 914 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 HMOX1P09601 288 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 NUCB1Q02818 461 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 ZMYND15Q9H091 742 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 NRKQ7Z2Y5 1582 aa17.54■□□□□ 0.4
CCHCR1-203ENST00000396268 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
CCHCR1-203ENST00000396268 FCHSD2O94868 740 aa17.53■□□□□ 0.4
CCHCR1-203ENST00000396268 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
CCHCR1-203ENST00000396268 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
CCHCR1-203ENST00000396268 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-203ENST00000396268 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 FMN2Q9NZ56 1722 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 ESCO1Q5FWF5 840 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms