RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 U2AF1Q01081 240 aaKnown RBP eCLIP8.89□□□□□ -0.99
BDNF-207ENST00000395986 FEZ1Q99689 392 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 SART3Q15020 963 aaKnown RBP8.89□□□□□ -0.99
BDNF-207ENST00000395986 ELF2Q15723 593 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 KCNG1Q9UIX4 513 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 RAD51AP2Q09MP3 1159 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 CAMK4Q16566 473 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 TRMT2AQ8IZ69 625 aaKnown RBP8.89□□□□□ -0.99
BDNF-207ENST00000395986 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 NOL10Q9BSC4 688 aaKnown RBP8.89□□□□□ -0.99
BDNF-207ENST00000395986 NRBP1Q9UHY1 535 aa8.89□□□□□ -0.99
BDNF-207ENST00000395986 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
BDNF-207ENST00000395986 SSH1Q8WYL5 1049 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 UPF3BQ9BZI7 483 aaKnown RBP8.88□□□□□ -0.99
BDNF-207ENST00000395986 KCNF1Q9H3M0 494 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 ST18O60284 1047 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 E2F4Q16254 413 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 CCDC186Q7Z3E2 898 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 SYAP1Q96A49 352 aaPredicted RBP8.88□□□□□ -0.99
BDNF-207ENST00000395986 GABPB1Q06547 395 aaPredicted RBP8.88□□□□□ -0.99
BDNF-207ENST00000395986 KIF18AQ8NI77 898 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 ABCA8O94911 1581 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 SOX12O15370 315 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 USP48Q86UV5 1035 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 ANKRD7Q92527 254 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 TESK2Q96S53 571 aa8.88□□□□□ -0.99
BDNF-207ENST00000395986 DDX41Q9UJV9 622 aaKnown RBP8.88□□□□□ -0.99
BDNF-207ENST00000395986 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 ZNF215Q9UL58 517 aaPredicted RBP8.87□□□□□ -0.99
BDNF-207ENST00000395986 ZCCHC17Q9NP64 241 aaKnown RBP8.87□□□□□ -0.99
BDNF-207ENST00000395986 AP5Z1O43299 807 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 MBD3O95983 291 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 TSHZ3Q63HK5 1081 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 KRBA2Q6ZNG9 492 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 KIAA1524Q8TCG1 905 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 OTUD7AQ8TE49 926 aaPredicted RBP8.87□□□□□ -0.99
BDNF-207ENST00000395986 DDX19BQ9UMR2 479 aa8.87□□□□□ -0.99
BDNF-207ENST00000395986 BRD2P25440 801 aaKnown RBP8.86□□□□□ -0.99
BDNF-207ENST00000395986 IBSPP21815 317 aaPredicted RBP8.86□□□□□ -0.99
BDNF-207ENST00000395986 SYT10Q6XYQ8 523 aa8.86□□□□□ -0.99
BDNF-207ENST00000395986 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
BDNF-207ENST00000395986 NCOA3Q9Y6Q9 1424 aa8.86□□□□□ -0.99
BDNF-207ENST00000395986 RABEP1Q15276 862 aa8.86□□□□□ -0.99
BDNF-207ENST00000395986 LCMT1Q9UIC8 334 aa8.86□□□□□ -0.99
BDNF-207ENST00000395986 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 IBTKQ9P2D0 1353 aaPredicted RBP8.85□□□□□ -0.99
BDNF-207ENST00000395986 CDC45O75419 566 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 FBXO38Q6PIJ6 1188 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 CKAP2LQ8IYA6 745 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 TRIM5Q9C035 493 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 NUCB1Q02818 461 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 PTPRGP23470 1445 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 KDM5CP41229 1560 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
BDNF-207ENST00000395986 LUZP1Q86V48 1076 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 MORC1Q86VD1 984 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
BDNF-207ENST00000395986 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 KDM4AO75164 1064 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 CCDC191Q8NCU4 936 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 KIAA1107Q9UPP5 1409 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 ABCC2Q92887 1545 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 PHF14O94880 888 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 BMP2KLQ5H9B9 411 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 TTLL5Q6EMB2 1281 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 FILIP1Q7Z7B0 1213 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 UHRF1BP1LA0JNW5 1464 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 KIF13AQ9H1H9 1805 aa8.84□□□□□ -0.99
BDNF-207ENST00000395986 CCDC34Q96HJ3 373 aa8.83□□□□□ -1
BDNF-207ENST00000395986 TMX3Q96JJ7 454 aa8.83□□□□□ -1
BDNF-207ENST00000395986 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
BDNF-207ENST00000395986 GOLGA6L6A8MZA4 724 aa8.83□□□□□ -1
BDNF-207ENST00000395986 CFAP43Q8NDM7 1665 aa8.83□□□□□ -1
BDNF-207ENST00000395986 RBM6P78332 1123 aaKnown RBP8.82□□□□□ -1
BDNF-207ENST00000395986 ST5P78524 1137 aa8.82□□□□□ -1
BDNF-207ENST00000395986 ERCC6LQ2NKX8 1250 aa8.82□□□□□ -1
BDNF-207ENST00000395986 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
BDNF-207ENST00000395986 LRRFIP2Q9Y608 721 aaKnown RBP8.82□□□□□ -1
BDNF-207ENST00000395986 USP27XA6NNY8 438 aa8.82□□□□□ -1
BDNF-207ENST00000395986 GSPT1P15170 499 aaKnown RBP8.82□□□□□ -1
BDNF-207ENST00000395986 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
BDNF-207ENST00000395986 BANK1Q8NDB2 785 aa8.82□□□□□ -1
BDNF-207ENST00000395986 HECW1Q76N89 1606 aa8.82□□□□□ -1
BDNF-207ENST00000395986 DHX16O60231 1041 aaKnown RBP8.82□□□□□ -1
BDNF-207ENST00000395986 LMOD3Q0VAK6 560 aa8.82□□□□□ -1
BDNF-207ENST00000395986 CEP135Q66GS9 1140 aa8.82□□□□□ -1
BDNF-207ENST00000395986 SPTLC3Q9NUV7 552 aa8.82□□□□□ -1
BDNF-207ENST00000395986 ERBINQ96RT1 1412 aa8.82□□□□□ -1
BDNF-207ENST00000395986 RAPGEF6Q8TEU7 1601 aa8.82□□□□□ -1
BDNF-207ENST00000395986 FAM177A1Q8N128 213 aaPredicted RBP8.81□□□□□ -1
BDNF-207ENST00000395986 EPC1Q9H2F5 836 aa8.81□□□□□ -1
BDNF-207ENST00000395986 NUP153P49790 1475 aaKnown RBP8.81□□□□□ -1
BDNF-207ENST00000395986 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms