RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 RRP7AQ9Y3A4 280 aaKnown RBP15.28■□□□□ 0.04
PHACTR3-205ENST00000395636 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.04
PHACTR3-205ENST00000395636 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
PHACTR3-205ENST00000395636 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
PHACTR3-205ENST00000395636 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
PHACTR3-205ENST00000395636 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
PHACTR3-205ENST00000395636 PIK3C2AO00443 1686 aa15.25■□□□□ 0.03
PHACTR3-205ENST00000395636 CLCN1P35523 988 aa15.25■□□□□ 0.03
PHACTR3-205ENST00000395636 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
PHACTR3-205ENST00000395636 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
PHACTR3-205ENST00000395636 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
PHACTR3-205ENST00000395636 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
PHACTR3-205ENST00000395636 FOXO3O43524 673 aa15.24■□□□□ 0.03
PHACTR3-205ENST00000395636 C20orf194Q5TEA3 1177 aa15.24■□□□□ 0.03
PHACTR3-205ENST00000395636 ZNF335Q9H4Z2 1342 aaPredicted RBP15.23■□□□□ 0.03
PHACTR3-205ENST00000395636 FRAT2O75474 233 aaPredicted RBP15.23■□□□□ 0.03
PHACTR3-205ENST00000395636 DDX17Q92841 729 aaKnown RBP15.23■□□□□ 0.03
PHACTR3-205ENST00000395636 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
PHACTR3-205ENST00000395636 DIAPH1O60610 1272 aaKnown RBP15.22■□□□□ 0.03
PHACTR3-205ENST00000395636 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
PHACTR3-205ENST00000395636 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
PHACTR3-205ENST00000395636 NLRP6P59044 892 aa15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 C19orf44Q9H6X5 657 aa15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 PEAK1Q9H792 1746 aa15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
PHACTR3-205ENST00000395636 HMOX1P09601 288 aa15.2■□□□□ 0.02
PHACTR3-205ENST00000395636 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
PHACTR3-205ENST00000395636 AAMPQ13685 434 aa15.2■□□□□ 0.02
PHACTR3-205ENST00000395636 AATKQ6ZMQ8 1374 aa15.2■□□□□ 0.02
PHACTR3-205ENST00000395636 TTC21AQ8NDW8 1320 aa15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 PSME1Q06323 249 aa15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 HSP90AB2PQ58FF8 381 aa15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 FGD1P98174 961 aa15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
PHACTR3-205ENST00000395636 IQSEC2Q5JU85 1478 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 C1orf167Q5SNV9 1468 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 IL13P35225 146 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
PHACTR3-205ENST00000395636 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
PHACTR3-205ENST00000395636 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
PHACTR3-205ENST00000395636 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
PHACTR3-205ENST00000395636 ATF3P18847 181 aa15.17■□□□□ 0.02
PHACTR3-205ENST00000395636 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
PHACTR3-205ENST00000395636 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
PHACTR3-205ENST00000395636 LRRC7Q96NW7 1537 aa15.16■□□□□ 0.02
PHACTR3-205ENST00000395636 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
PHACTR3-205ENST00000395636 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
PHACTR3-205ENST00000395636 MST1RQ04912 1400 aa15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 BCAR3O75815 825 aa15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 AEBP1Q8IUX7 1158 aa15.15■□□□□ 0.02
PHACTR3-205ENST00000395636 TPM2P07951 284 aa15.14■□□□□ 0.01
PHACTR3-205ENST00000395636 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
PHACTR3-205ENST00000395636 PDE3AQ14432 1141 aa15.14■□□□□ 0.01
PHACTR3-205ENST00000395636 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
PHACTR3-205ENST00000395636 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
PHACTR3-205ENST00000395636 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
PHACTR3-205ENST00000395636 ZBTB7CA1YPR0 619 aa15.11■□□□□ 0.01
PHACTR3-205ENST00000395636 CANXP27824 592 aaKnown RBP15.11■□□□□ 0.01
PHACTR3-205ENST00000395636 PDE4CQ08493 712 aa15.11■□□□□ 0.01
PHACTR3-205ENST00000395636 MSH6P52701 1360 aa15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 FCHSD2O94868 740 aa15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 AMPHP49418 695 aa15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 TRPM3Q9HCF6 1732 aaPredicted RBP15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
PHACTR3-205ENST00000395636 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 CADPS2Q86UW7 1296 aa15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 LTV1Q96GA3 475 aaPredicted RBP15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 LTN1O94822 1766 aa15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 RIPK4P57078 832 aa15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
PHACTR3-205ENST00000395636 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
PHACTR3-205ENST00000395636 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0
PHACTR3-205ENST00000395636 USP54Q70EL1 1684 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 HOXC9P31274 260 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 FAM161AQ3B820 660 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 SBNO1A3KN83 1393 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 FLT4P35916 1363 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 DCCP43146 1447 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 NFAT5O94916 1531 aa15.07■□□□□ 0
PHACTR3-205ENST00000395636 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
PHACTR3-205ENST00000395636 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
PHACTR3-205ENST00000395636 RGPD1P0DJD0 1748 aa15.06■□□□□ 0
PHACTR3-205ENST00000395636 KIF1AQ12756 1690 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms