RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
BBS4-202ENST00000395205 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
BBS4-202ENST00000395205 PLEKHF1Q96S99 279 aa13.03□□□□□ -0.32
BBS4-202ENST00000395205 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
BBS4-202ENST00000395205 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
BBS4-202ENST00000395205 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.32
BBS4-202ENST00000395205 PRKAR2BP31323 418 aa13.02□□□□□ -0.32
BBS4-202ENST00000395205 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
BBS4-202ENST00000395205 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
BBS4-202ENST00000395205 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
BBS4-202ENST00000395205 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
BBS4-202ENST00000395205 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
BBS4-202ENST00000395205 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
BBS4-202ENST00000395205 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
BBS4-202ENST00000395205 RTL1A6NKG5 1358 aa13□□□□□ -0.33
BBS4-202ENST00000395205 SLIT3O75094 1523 aa13□□□□□ -0.33
BBS4-202ENST00000395205 EYA1Q99502 592 aa13□□□□□ -0.33
BBS4-202ENST00000395205 USP54Q70EL1 1684 aa13□□□□□ -0.33
BBS4-202ENST00000395205 NFAT5O94916 1531 aa12.99□□□□□ -0.33
BBS4-202ENST00000395205 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
BBS4-202ENST00000395205 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
BBS4-202ENST00000395205 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
BBS4-202ENST00000395205 MARF1Q9Y4F3 1742 aaKnown RBP12.98□□□□□ -0.33
BBS4-202ENST00000395205 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
BBS4-202ENST00000395205 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
BBS4-202ENST00000395205 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
BBS4-202ENST00000395205 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
BBS4-202ENST00000395205 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
BBS4-202ENST00000395205 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
BBS4-202ENST00000395205 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
BBS4-202ENST00000395205 RIPK4P57078 832 aa12.97□□□□□ -0.33
BBS4-202ENST00000395205 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
BBS4-202ENST00000395205 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
BBS4-202ENST00000395205 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
BBS4-202ENST00000395205 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
BBS4-202ENST00000395205 IGSF1Q8N6C5 1336 aa12.96□□□□□ -0.34
BBS4-202ENST00000395205 ZNF521Q96K83 1311 aa12.96□□□□□ -0.34
BBS4-202ENST00000395205 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.34
BBS4-202ENST00000395205 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.34
BBS4-202ENST00000395205 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 ROBO1Q9Y6N7 1651 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 USHBP1Q8N6Y0 703 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
BBS4-202ENST00000395205 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
BBS4-202ENST00000395205 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
BBS4-202ENST00000395205 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 CPDO75976 1380 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 E9PSI1 815 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
BBS4-202ENST00000395205 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
BBS4-202ENST00000395205 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
BBS4-202ENST00000395205 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
BBS4-202ENST00000395205 ERBB3P21860 1342 aa12.91□□□□□ -0.34
BBS4-202ENST00000395205 KDRP35968 1356 aa12.91□□□□□ -0.34
BBS4-202ENST00000395205 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
BBS4-202ENST00000395205 LTN1O94822 1766 aa12.9□□□□□ -0.34
BBS4-202ENST00000395205 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
BBS4-202ENST00000395205 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
BBS4-202ENST00000395205 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
BBS4-202ENST00000395205 EVA1CP58658 441 aa12.89□□□□□ -0.35
BBS4-202ENST00000395205 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
BBS4-202ENST00000395205 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
BBS4-202ENST00000395205 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
BBS4-202ENST00000395205 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
BBS4-202ENST00000395205 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
BBS4-202ENST00000395205 TRMT2AQ8IZ69 625 aaKnown RBP12.88□□□□□ -0.35
BBS4-202ENST00000395205 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
BBS4-202ENST00000395205 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
BBS4-202ENST00000395205 CALD1Q05682 793 aaKnown RBP12.87□□□□□ -0.35
BBS4-202ENST00000395205 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
BBS4-202ENST00000395205 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
BBS4-202ENST00000395205 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
BBS4-202ENST00000395205 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
BBS4-202ENST00000395205 RGPD1P0DJD0 1748 aa12.87□□□□□ -0.35
BBS4-202ENST00000395205 ADAMTS2O95450 1211 aa12.87□□□□□ -0.35
BBS4-202ENST00000395205 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
BBS4-202ENST00000395205 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
BBS4-202ENST00000395205 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
BBS4-202ENST00000395205 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
BBS4-202ENST00000395205 IL16Q14005 1332 aa12.86□□□□□ -0.35
BBS4-202ENST00000395205 NEFLP07196 543 aa12.86□□□□□ -0.35
BBS4-202ENST00000395205 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
BBS4-202ENST00000395205 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
BBS4-202ENST00000395205 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
BBS4-202ENST00000395205 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
BBS4-202ENST00000395205 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
BBS4-202ENST00000395205 MCM10Q7L590 875 aa12.85□□□□□ -0.35
BBS4-202ENST00000395205 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
BBS4-202ENST00000395205 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
BBS4-202ENST00000395205 GNAT3A8MTJ3 354 aa12.84□□□□□ -0.35
BBS4-202ENST00000395205 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
BBS4-202ENST00000395205 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
BBS4-202ENST00000395205 ABCC6O95255 1503 aa12.83□□□□□ -0.35
BBS4-202ENST00000395205 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
BBS4-202ENST00000395205 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms