RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.7□□□□□ -1.341e-6■■■■□ 20.7
GAPVD1-206ENST00000394104 TMX1Q9H3N1 280 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 BCCIPQ9P287 314 aaKnown RBP eCLIP6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 ANAPC15P60006 121 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 CABP2Q9NPB3 220 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 GNL3LQ9NVN8 582 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 PRDM2Q13029 1718 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 CYP46A1Q9Y6A2 500 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 USP5P45974 858 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 TRIM22Q8IYM9 498 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 TAF4BQ92750 862 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 GGNBP2Q9H3C7 697 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 FHOD3Q2V2M9 1422 aa6.7□□□□□ -1.34
GAPVD1-206ENST00000394104 JMYQ8N9B5 988 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 IL27Q8NEV9 243 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 PSMD1Q99460 953 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 PDCP20941 246 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 CEP57L1Q8IYX8 460 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 CCDC148Q8NFR7 591 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 NOL7Q9UMY1 257 aaKnown RBP6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 PUS7Q96PZ0 661 aaKnown RBP6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 STRN4Q9NRL3 753 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 UBE4AQ14139 1066 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 CCDC57Q2TAC2 916 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 ZSCAN29Q8IWY8 852 aaPredicted RBP6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 EIF5P55010 431 aaKnown RBP6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 NOB1Q9ULX3 412 aaKnown RBP6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
GAPVD1-206ENST00000394104 EPB41L2O43491 1005 aaKnown RBP6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 STAMBPO95630 424 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 CASQ1P31415 396 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 USP8P40818 1118 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 FKBP4Q02790 459 aaKnown RBP eCLIP6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 CCDC178Q5BJE1 867 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 MYL6BP14649 208 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 GNAI2P04899 355 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 MCM2P49736 904 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 CAMK4Q16566 473 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 LARP1BQ659C4 914 aaKnown RBP6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 SPATA32Q96LK8 384 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 TTC16Q8NEE8 873 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 ZNF397Q8NF99 534 aaPredicted RBP6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 NACAP1Q9BZK3 213 aa6.68□□□□□ -1.34
GAPVD1-206ENST00000394104 DNA2P51530 1060 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 ANKRD1Q15327 319 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 TMCO3Q6UWJ1 677 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 GRPEL1Q9HAV7 217 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 SHTN1A0MZ66 631 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 RBM25P49756 843 aaKnown RBP6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 RNF187Q5TA31 235 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 CTNNBL1Q8WYA6 563 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 BMP2KQ9NSY1 1161 aaPredicted RBP6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 PODXL2Q9NZ53 605 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 GNAI3P08754 354 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 TNNT1P13805 278 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 POTEJP0CG39 1038 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 TDO2P48775 406 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 TRIM21P19474 475 aaKnown RBP6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 KRT85P78386 507 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 FILIP1Q7Z7B0 1213 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 PDRG1Q9NUG6 133 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 SERPINA10Q9UK55 444 aa6.67□□□□□ -1.34
GAPVD1-206ENST00000394104 ABTB2Q8N961 1025 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 SCLT1Q96NL6 688 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 UPF3BQ9BZI7 483 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 MIA2Q96PC5 1412 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 TDRD9Q8NDG6 1382 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 CBX1P83916 185 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 DHX8Q14562 1220 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 GPATCH11Q8N954 259 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 WDR33Q9C0J8 1336 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 SPDYE4A6NLX3 237 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 RSPH4AQ5TD94 716 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 RAI14Q9P0K7 980 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 SMG6Q86US8 1419 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 CNTLNQ9NXG0 1405 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 K7ELQ4 463 aaPredicted RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 CABP4P57796 275 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 IFFO1Q0D2I5 559 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 OSCARQ8IYS5 282 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 CRACR2AQ9BSW2 395 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 NUP62CLQ9H1M0 184 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 SMTNL1A8MU46 457 aa6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 CWC27Q6UX04 472 aaKnown RBP6.66□□□□□ -1.34
GAPVD1-206ENST00000394104 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 MYCNP04198 464 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 NLRP6P59044 892 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 JAKMIP1Q96N16 626 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 UBA5Q9GZZ9 404 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 SPA17Q15506 151 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 AACSQ86V21 672 aa6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 DDX54Q8TDD1 881 aaKnown RBP6.65□□□□□ -1.34
GAPVD1-206ENST00000394104 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms