RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 ZNF830Q96NB3 372 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 MKL2Q9ULH7 1088 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 FRMD4BQ9Y2L6 1034 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 RNF8O76064 485 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 CCDC96Q2M329 555 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 SYNE3Q6ZMZ3 975 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 CENPQQ7L2Z9 268 aaPredicted RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 WWC3Q9ULE0 1092 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 SMIM23A6NLE4 172 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 FOSL2P15408 326 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 GCKP35557 465 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 MATR3P43243 847 aaKnown RBP eCLIP3.85□□□□□ -1.797e-7■■□□□ 14.2
PHF3-202ENST00000393387 STK3Q13188 491 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 SLMAPQ14BN4 828 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 NBPF1Q3BBV0 1214 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 ISM2Q6H9L7 571 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 RSRC1Q96IZ7 334 aaKnown RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 C22orf23Q9BZE7 217 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 RASSF4Q9H2L5 321 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 CENPJQ9HC77 1338 aaPredicted RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 DCAF1Q9Y4B6 1507 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 CHMP2AO43633 222 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 TPD52P55327 224 aaPredicted RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 TMEM132AQ24JP5 1023 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 FILIP1LQ4L180 1135 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 SYCE3A1L190 88 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 G3V3G9 751 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 HSPA5P11021 654 aaKnown RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 DCAF8Q5TAQ9 597 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 RMDN2Q96LZ7 410 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 BICDL2A1A5D9 508 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 KIF3BO15066 747 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 U2AF1L5P0DN76 240 aaPredicted RBP3.85□□□□□ -1.79
PHF3-202ENST00000393387 U2AF1Q01081 240 aaKnown RBP eCLIP3.85□□□□□ -1.79
PHF3-202ENST00000393387 CCDC174Q6PII3 467 aa3.85□□□□□ -1.79
PHF3-202ENST00000393387 HGSO14964 777 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 NECTIN2Q92692 538 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 DACT3Q96B18 629 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 KIF5BP33176 963 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 PRKG1Q13976 671 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 SETDB1Q15047 1291 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 INF2Q27J81 1249 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 JAKMIP3Q5VZ66 844 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 AP1ARQ63HQ0 302 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 PDCD7Q8N8D1 485 aaKnown RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 TNMDQ9H2S6 317 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 CWC25Q9NXE8 425 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 BUB1BO60566 1050 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 ZBTB41Q5SVQ8 909 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 CCDC148Q8NFR7 591 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 CHMP4CQ96CF2 233 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 NUCKS1Q9H1E3 243 aaKnown RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 VPS18Q9P253 973 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 ZFYP08048 801 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 PPM1FP49593 454 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 HDGFP51858 240 aaKnown RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 RRP1P56182 461 aaKnown RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 ZSCAN30Q86W11 494 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 CXorf38Q8TB03 319 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 CTNNBL1Q8WYA6 563 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 TSPYL2Q9H2G4 693 aaPredicted RBP3.84□□□□□ -1.79
PHF3-202ENST00000393387 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.79
PHF3-202ENST00000393387 PTPN14Q15678 1187 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 RABGAP1Q9Y3P9 1069 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 CCER2I3L3R5 266 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 PSMC4P43686 418 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 PPP2R5AQ15172 486 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 RUFY3Q7L099 469 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 CCDC170Q8IYT3 715 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 FNBP4Q8N3X1 1017 aaPredicted RBP3.84□□□□□ -1.8
PHF3-202ENST00000393387 NGEFQ8N5V2 710 aa3.84□□□□□ -1.8
PHF3-202ENST00000393387 PRPF38AQ8NAV1 312 aaKnown RBP3.84□□□□□ -1.8
PHF3-202ENST00000393387 PLEKHD1A6NEE1 506 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 EIF3DO15371 548 aaKnown RBP eCLIP3.83□□□□□ -1.8
PHF3-202ENST00000393387 PHACTR2O75167 634 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 C6orf163Q5TEZ5 329 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 RAB3IL1Q8TBN0 382 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 GTF3C6Q969F1 213 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 CPLX3Q8WVH0 158 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 ATRIPQ8WXE1 791 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 ZNF428Q96B54 188 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 SELENOSQ9BQE4 189 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 XAB2Q9HCS7 855 aaKnown RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 ANLNQ9NQW6 1124 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 ZC4H2Q9NQZ6 224 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 KINO60870 393 aaKnown RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 CAPN2P17655 700 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 PCK1P35558 622 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 MAP2K2P36507 400 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 ZC3H6P61129 1189 aaKnown RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 TRIM68Q6AZZ1 485 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 CCDC121Q6ZUS5 278 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 FLCNQ8NFG4 579 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 TAF4BQ92750 862 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 DDX41Q9UJV9 622 aaKnown RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 GSTTP1A0A1W2PQM5 241 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 PFDN1O60925 122 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 TACO1Q9BSH4 297 aaKnown RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 CTDP1Q9Y5B0 961 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms