RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.08
PDGFD-202ENST00000393158 RSPH6AQ9H0K4 717 aa14.52□□□□□ -0.09
PDGFD-202ENST00000393158 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
PDGFD-202ENST00000393158 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
PDGFD-202ENST00000393158 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
PDGFD-202ENST00000393158 HNRNPUQ00839 825 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDGFD-202ENST00000393158 EIF4A2Q14240 407 aaKnown RBP14.51□□□□□ -0.09
PDGFD-202ENST00000393158 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
PDGFD-202ENST00000393158 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
PDGFD-202ENST00000393158 FLT4P35916 1363 aa14.5□□□□□ -0.09
PDGFD-202ENST00000393158 NLRP6P59044 892 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 PSME1Q06323 249 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 HOXC9P31274 260 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 NPHP3Q7Z494 1330 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
PDGFD-202ENST00000393158 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
PDGFD-202ENST00000393158 CPDO75976 1380 aa14.48□□□□□ -0.09
PDGFD-202ENST00000393158 GCP02774 474 aa14.47□□□□□ -0.09
PDGFD-202ENST00000393158 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
PDGFD-202ENST00000393158 PHACTR3Q96KR7 559 aa14.47□□□□□ -0.09
PDGFD-202ENST00000393158 AEBP1Q8IUX7 1158 aa14.46□□□□□ -0.09
PDGFD-202ENST00000393158 COL14A1Q05707 1796 aaKnown RBP14.45□□□□□ -0.1
PDGFD-202ENST00000393158 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
PDGFD-202ENST00000393158 ARHGEF10O15013 1369 aa14.45□□□□□ -0.1
PDGFD-202ENST00000393158 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
PDGFD-202ENST00000393158 DIAPH1O60610 1272 aaKnown RBP14.44□□□□□ -0.1
PDGFD-202ENST00000393158 SCN11AQ9UI33 1791 aa14.44□□□□□ -0.1
PDGFD-202ENST00000393158 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
PDGFD-202ENST00000393158 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
PDGFD-202ENST00000393158 APAF1O14727 1248 aa14.43□□□□□ -0.1
PDGFD-202ENST00000393158 KDM3BQ7LBC6 1761 aa14.43□□□□□ -0.1
PDGFD-202ENST00000393158 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
PDGFD-202ENST00000393158 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
PDGFD-202ENST00000393158 PARP4Q9UKK3 1724 aaKnown RBP14.43□□□□□ -0.1
PDGFD-202ENST00000393158 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
PDGFD-202ENST00000393158 IP6K1Q92551 441 aa14.43□□□□□ -0.1
PDGFD-202ENST00000393158 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
PDGFD-202ENST00000393158 NCBP3Q53F19 620 aaKnown RBP14.42□□□□□ -0.1
PDGFD-202ENST00000393158 EYA1Q99502 592 aa14.42□□□□□ -0.1
PDGFD-202ENST00000393158 TOGARAM1Q9Y4F4 1720 aa14.42□□□□□ -0.1
PDGFD-202ENST00000393158 GLI3P10071 1580 aa14.42□□□□□ -0.1
PDGFD-202ENST00000393158 RUNDC1Q96C34 613 aa14.41□□□□□ -0.1
PDGFD-202ENST00000393158 SOX12O15370 315 aa14.41□□□□□ -0.1
PDGFD-202ENST00000393158 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
PDGFD-202ENST00000393158 KIAA0232Q92628 1395 aa14.4□□□□□ -0.1
PDGFD-202ENST00000393158 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
PDGFD-202ENST00000393158 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
PDGFD-202ENST00000393158 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
PDGFD-202ENST00000393158 FCHSD2O94868 740 aa14.4□□□□□ -0.1
PDGFD-202ENST00000393158 DUSP27Q5VZP5 1158 aa14.39□□□□□ -0.11
PDGFD-202ENST00000393158 WDR43Q15061 677 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDGFD-202ENST00000393158 PPM1GO15355 546 aaPredicted RBP14.39□□□□□ -0.11
PDGFD-202ENST00000393158 HMOX1P09601 288 aa14.39□□□□□ -0.11
PDGFD-202ENST00000393158 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
PDGFD-202ENST00000393158 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
PDGFD-202ENST00000393158 ERBB3P21860 1342 aa14.39□□□□□ -0.11
PDGFD-202ENST00000393158 U2AF1L5P0DN76 240 aaPredicted RBP14.38□□□□□ -0.11
PDGFD-202ENST00000393158 U2AF1Q01081 240 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDGFD-202ENST00000393158 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
PDGFD-202ENST00000393158 MEGF6O75095 1541 aa14.38□□□□□ -0.11
PDGFD-202ENST00000393158 LRP6O75581 1613 aa14.38□□□□□ -0.11
PDGFD-202ENST00000393158 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
PDGFD-202ENST00000393158 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
PDGFD-202ENST00000393158 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
PDGFD-202ENST00000393158 PRKAR2BP31323 418 aa14.37□□□□□ -0.11
PDGFD-202ENST00000393158 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
PDGFD-202ENST00000393158 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
PDGFD-202ENST00000393158 SLFN5Q08AF3 891 aa14.36□□□□□ -0.11
PDGFD-202ENST00000393158 CRB1P82279 1406 aa14.35□□□□□ -0.11
PDGFD-202ENST00000393158 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
PDGFD-202ENST00000393158 UBR2Q8IWV8 1755 aa14.34□□□□□ -0.11
PDGFD-202ENST00000393158 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
PDGFD-202ENST00000393158 SULT6B1Q6IMI4 303 aa14.34□□□□□ -0.11
PDGFD-202ENST00000393158 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
PDGFD-202ENST00000393158 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
PDGFD-202ENST00000393158 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
PDGFD-202ENST00000393158 NUDCQ9Y266 331 aa14.33□□□□□ -0.12
PDGFD-202ENST00000393158 ITGB4P16144 1822 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 SLIT2O94813 1529 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 CERKQ8TCT0 537 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 C5P01031 1676 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 USHBP1Q8N6Y0 703 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
PDGFD-202ENST00000393158 MRC1P22897 1456 aa14.31□□□□□ -0.12
PDGFD-202ENST00000393158 AMPHP49418 695 aa14.31□□□□□ -0.12
PDGFD-202ENST00000393158 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
PDGFD-202ENST00000393158 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
PDGFD-202ENST00000393158 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
PDGFD-202ENST00000393158 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
PDGFD-202ENST00000393158 ANKRD24Q8TF21 1146 aa14.3□□□□□ -0.12
PDGFD-202ENST00000393158 PDE3BQ13370 1112 aa14.29□□□□□ -0.12
PDGFD-202ENST00000393158 N4BP2Q86UW6 1770 aaPredicted RBP14.29□□□□□ -0.12
PDGFD-202ENST00000393158 OVOS2A0A0G2JMS6 1433 aa14.28□□□□□ -0.12
PDGFD-202ENST00000393158 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
PDGFD-202ENST00000393158 THSD7AQ9UPZ6 1657 aa14.28□□□□□ -0.12
PDGFD-202ENST00000393158 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
PDGFD-202ENST00000393158 NGEFQ8N5V2 710 aa14.28□□□□□ -0.12
PDGFD-202ENST00000393158 THUMPD2Q9BTF0 503 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms