RNA–Protein interactions for RNA: ENST00000393125.6

GRIA4-202, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-202ENST00000393125 MCM10Q7L590 875 aa16.39■□□□□ 0.21
GRIA4-202ENST00000393125 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
GRIA4-202ENST00000393125 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
GRIA4-202ENST00000393125 HSCBQ8IWL3 235 aa16.39■□□□□ 0.21
GRIA4-202ENST00000393125 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
GRIA4-202ENST00000393125 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
GRIA4-202ENST00000393125 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
GRIA4-202ENST00000393125 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
GRIA4-202ENST00000393125 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
GRIA4-202ENST00000393125 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
GRIA4-202ENST00000393125 FAM135BQ49AJ0 1406 aa16.35■□□□□ 0.21
GRIA4-202ENST00000393125 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
GRIA4-202ENST00000393125 HSP90AB2PQ58FF8 381 aa16.35■□□□□ 0.21
GRIA4-202ENST00000393125 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
GRIA4-202ENST00000393125 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
GRIA4-202ENST00000393125 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
GRIA4-202ENST00000393125 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
GRIA4-202ENST00000393125 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
GRIA4-202ENST00000393125 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.2
GRIA4-202ENST00000393125 MCM4P33991 863 aa16.33■□□□□ 0.2
GRIA4-202ENST00000393125 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
GRIA4-202ENST00000393125 PRR36Q9H6K5 1346 aa16.33■□□□□ 0.2
GRIA4-202ENST00000393125 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
GRIA4-202ENST00000393125 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
GRIA4-202ENST00000393125 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
GRIA4-202ENST00000393125 CHMP5Q9NZZ3 219 aa16.32■□□□□ 0.2
GRIA4-202ENST00000393125 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
GRIA4-202ENST00000393125 FOXO3O43524 673 aa16.32■□□□□ 0.2
GRIA4-202ENST00000393125 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
GRIA4-202ENST00000393125 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
GRIA4-202ENST00000393125 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
GRIA4-202ENST00000393125 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
GRIA4-202ENST00000393125 MED14O60244 1454 aa16.31■□□□□ 0.2
GRIA4-202ENST00000393125 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
GRIA4-202ENST00000393125 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
GRIA4-202ENST00000393125 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
GRIA4-202ENST00000393125 GCC1Q96CN9 775 aa16.3■□□□□ 0.2
GRIA4-202ENST00000393125 ACEP12821 1306 aa16.3■□□□□ 0.2
GRIA4-202ENST00000393125 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
GRIA4-202ENST00000393125 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
GRIA4-202ENST00000393125 CPS1P31327 1500 aa16.29■□□□□ 0.2
GRIA4-202ENST00000393125 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
GRIA4-202ENST00000393125 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
GRIA4-202ENST00000393125 TRAK2O60296 914 aa16.29■□□□□ 0.2
GRIA4-202ENST00000393125 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
GRIA4-202ENST00000393125 API5Q9BZZ5 524 aaKnown RBP16.29■□□□□ 0.2
GRIA4-202ENST00000393125 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
GRIA4-202ENST00000393125 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
GRIA4-202ENST00000393125 F6X3S4 739 aa16.27■□□□□ 0.2
GRIA4-202ENST00000393125 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
GRIA4-202ENST00000393125 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
GRIA4-202ENST00000393125 PANK2Q9BZ23 570 aa16.27■□□□□ 0.19
GRIA4-202ENST00000393125 ATP7BP35670 1465 aa16.27■□□□□ 0.19
GRIA4-202ENST00000393125 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
GRIA4-202ENST00000393125 ABCC4O15439 1325 aa16.26■□□□□ 0.19
GRIA4-202ENST00000393125 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
GRIA4-202ENST00000393125 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
GRIA4-202ENST00000393125 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
GRIA4-202ENST00000393125 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
GRIA4-202ENST00000393125 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
GRIA4-202ENST00000393125 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
GRIA4-202ENST00000393125 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
GRIA4-202ENST00000393125 LTKP29376 864 aa16.25■□□□□ 0.19
GRIA4-202ENST00000393125 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
GRIA4-202ENST00000393125 MEIS3Q99687 375 aa16.25■□□□□ 0.19
GRIA4-202ENST00000393125 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
GRIA4-202ENST00000393125 GOLGA6L3A6NEY3 463 aa16.25■□□□□ 0.19
GRIA4-202ENST00000393125 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
GRIA4-202ENST00000393125 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
GRIA4-202ENST00000393125 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
GRIA4-202ENST00000393125 TNPO1Q92973 898 aaKnown RBP16.23■□□□□ 0.19
GRIA4-202ENST00000393125 KIF2CQ99661 725 aa16.23■□□□□ 0.19
GRIA4-202ENST00000393125 ANKRD26Q9UPS8 1709 aa16.23■□□□□ 0.19
GRIA4-202ENST00000393125 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
GRIA4-202ENST00000393125 G2E3Q7L622 706 aa16.23■□□□□ 0.19
GRIA4-202ENST00000393125 PLEKHM2Q8IWE5 1019 aa16.23■□□□□ 0.19
GRIA4-202ENST00000393125 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
GRIA4-202ENST00000393125 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
GRIA4-202ENST00000393125 XRCC6P12956 609 aaKnown RBP eCLIP16.22■□□□□ 0.19
GRIA4-202ENST00000393125 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
GRIA4-202ENST00000393125 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
GRIA4-202ENST00000393125 AMPHP49418 695 aa16.22■□□□□ 0.19
GRIA4-202ENST00000393125 CDC45O75419 566 aa16.21■□□□□ 0.19
GRIA4-202ENST00000393125 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
GRIA4-202ENST00000393125 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
GRIA4-202ENST00000393125 PTCH1Q13635 1447 aa16.21■□□□□ 0.18
GRIA4-202ENST00000393125 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
GRIA4-202ENST00000393125 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
GRIA4-202ENST00000393125 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
GRIA4-202ENST00000393125 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
GRIA4-202ENST00000393125 CHL1O00533 1208 aa16.2■□□□□ 0.18
GRIA4-202ENST00000393125 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 MSH6P52701 1360 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 TNRQ92752 1358 aa16.19■□□□□ 0.18
GRIA4-202ENST00000393125 K7ELQ4 463 aaPredicted RBP16.18■□□□□ 0.18
GRIA4-202ENST00000393125 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
GRIA4-202ENST00000393125 AMOTL2Q9Y2J4 779 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms