RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 EMILIN1Q9Y6C2 1016 aa34.49■■■■□ 3.11
HOMER3-202ENST00000392351 AMPHP49418 695 aa34.48■■■■□ 3.11
HOMER3-202ENST00000392351 BCL9LQ86UU0 1499 aa34.48■■■■□ 3.11
HOMER3-202ENST00000392351 USP21Q9UK80 565 aa34.47■■■■□ 3.11
HOMER3-202ENST00000392351 AXIN2Q9Y2T1 843 aa34.47■■■■□ 3.11
HOMER3-202ENST00000392351 RTL1A6NKG5 1358 aa34.46■■■■□ 3.11
HOMER3-202ENST00000392351 ILDR2Q71H61 639 aa34.46■■■■□ 3.11
HOMER3-202ENST00000392351 POLKQ9UBT6 870 aa34.46■■■■□ 3.11
HOMER3-202ENST00000392351 PPM1GO15355 546 aaPredicted RBP34.45■■■■□ 3.1
HOMER3-202ENST00000392351 PARD3Q8TEW0 1356 aa34.44■■■■□ 3.1
HOMER3-202ENST00000392351 IP6K1Q92551 441 aa34.44■■■■□ 3.1
HOMER3-202ENST00000392351 COL5A2P05997 1499 aaPredicted RBP34.44■■■■□ 3.1
HOMER3-202ENST00000392351 HOXC9P31274 260 aa34.43■■■■□ 3.1
HOMER3-202ENST00000392351 UNC5CLQ8IV45 518 aa34.43■■■■□ 3.1
HOMER3-202ENST00000392351 FLT4P35916 1363 aa34.42■■■■□ 3.1
HOMER3-202ENST00000392351 KIF24Q5T7B8 1368 aa34.42■■■■□ 3.1
HOMER3-202ENST00000392351 BLMP54132 1417 aaPredicted RBP34.42■■■■□ 3.1
HOMER3-202ENST00000392351 SMG6Q86US8 1419 aaKnown RBP34.42■■■■□ 3.1
HOMER3-202ENST00000392351 STRN4Q9NRL3 753 aa34.41■■■■□ 3.1
HOMER3-202ENST00000392351 ZNF772Q68DY9 489 aaPredicted RBP34.4■■■■□ 3.1
HOMER3-202ENST00000392351 EVA1CP58658 441 aa34.39■■■■□ 3.1
HOMER3-202ENST00000392351 RGS17Q9UGC6 210 aaPredicted RBP34.39■■■■□ 3.1
HOMER3-202ENST00000392351 RALBP1Q15311 655 aa34.36■■■■□ 3.09
HOMER3-202ENST00000392351 CDK12Q9NYV4 1490 aaPredicted RBP34.36■■■■□ 3.09
HOMER3-202ENST00000392351 HSP90AB2PQ58FF8 381 aa34.36■■■■□ 3.09
HOMER3-202ENST00000392351 MTHFSP49914 203 aa34.35■■■■□ 3.09
HOMER3-202ENST00000392351 ERBB3P21860 1342 aa34.35■■■■□ 3.09
HOMER3-202ENST00000392351 INSRP06213 1382 aa34.34■■■■□ 3.09
HOMER3-202ENST00000392351 PPP2R1AP30153 589 aa34.34■■■■□ 3.09
HOMER3-202ENST00000392351 ATRNO75882 1429 aa34.34■■■■□ 3.09
HOMER3-202ENST00000392351 ANKRD24Q8TF21 1146 aa34.33■■■■□ 3.09
HOMER3-202ENST00000392351 LTV1Q96GA3 475 aaPredicted RBP34.33■■■■□ 3.09
HOMER3-202ENST00000392351 TRPC5Q9UL62 973 aaPredicted RBP34.33■■■■□ 3.09
HOMER3-202ENST00000392351 CSB-PGBD3P0DP91 1061 aa34.32■■■■□ 3.09
HOMER3-202ENST00000392351 PRKRIP1Q9H875 184 aaPredicted RBP34.32■■■■□ 3.09
HOMER3-202ENST00000392351 QTRT2Q9H974 415 aaKnown RBP34.32■■■■□ 3.09
HOMER3-202ENST00000392351 FAM208AQ9UK61 1670 aaKnown RBP34.32■■■■□ 3.09
HOMER3-202ENST00000392351 LARP1Q6PKG0 1096 aaKnown RBP34.32■■■■□ 3.08
HOMER3-202ENST00000392351 WDR17Q8IZU2 1322 aa34.31■■■■□ 3.08
HOMER3-202ENST00000392351 VPS72Q15906 364 aa34.31■■■■□ 3.08
HOMER3-202ENST00000392351 CCDC9Q9Y3X0 531 aaKnown RBP34.31■■■■□ 3.08
HOMER3-202ENST00000392351 RGPD2P0DJD1 1756 aa34.3■■■■□ 3.08
HOMER3-202ENST00000392351 CRB1P82279 1406 aa34.28■■■■□ 3.08
HOMER3-202ENST00000392351 POTEAQ6S8J7 498 aa34.27■■■■□ 3.08
HOMER3-202ENST00000392351 TOM1L2Q6ZVM7 507 aa34.27■■■■□ 3.08
HOMER3-202ENST00000392351 GLI3P10071 1580 aa34.25■■■■□ 3.07
HOMER3-202ENST00000392351 SPATA31A5Q5VU36 1347 aa34.24■■■■□ 3.07
HOMER3-202ENST00000392351 SPATA31A7Q8IWB4 1347 aa34.24■■■■□ 3.07
HOMER3-202ENST00000392351 MYBBP1AQ9BQG0 1328 aaKnown RBP34.24■■■■□ 3.07
HOMER3-202ENST00000392351 ANP32CO43423 234 aa34.24■■■■□ 3.07
HOMER3-202ENST00000392351 GJD4Q96KN9 370 aaPredicted RBP34.23■■■■□ 3.07
HOMER3-202ENST00000392351 NLRP2Q9NX02 1062 aa34.23■■■■□ 3.07
HOMER3-202ENST00000392351 USP35Q9P2H5 1018 aa34.23■■■■□ 3.07
HOMER3-202ENST00000392351 SPATA31A1Q5TZJ5 1347 aa34.22■■■■□ 3.07
HOMER3-202ENST00000392351 EIF4A2Q14240 407 aaKnown RBP34.22■■■■□ 3.07
HOMER3-202ENST00000392351 COL3A1P02461 1466 aaPredicted RBP34.2■■■■□ 3.06
HOMER3-202ENST00000392351 CFAP53Q96M91 514 aa34.19■■■■□ 3.06
HOMER3-202ENST00000392351 CARD10Q9BWT7 1032 aa34.19■■■■□ 3.06
HOMER3-202ENST00000392351 RBM6P78332 1123 aaKnown RBP34.18■■■■□ 3.06
HOMER3-202ENST00000392351 WNK3Q9BYP7 1800 aa34.17■■■■□ 3.06
HOMER3-202ENST00000392351 RXRBP28702 533 aa34.17■■■■□ 3.06
HOMER3-202ENST00000392351 NBPF6Q5VWK0 638 aa34.15■■■■□ 3.06
HOMER3-202ENST00000392351 DIEXFQ68CQ4 756 aaKnown RBP34.15■■■■□ 3.06
HOMER3-202ENST00000392351 TCP11L2Q8N4U5 519 aa34.15■■■■□ 3.06
HOMER3-202ENST00000392351 NBPF4Q96M43 638 aa34.15■■■■□ 3.06
HOMER3-202ENST00000392351 DIAPH1O60610 1272 aaKnown RBP34.14■■■■□ 3.06
HOMER3-202ENST00000392351 RGPD1P0DJD0 1748 aa34.13■■■■□ 3.05
HOMER3-202ENST00000392351 IL13P35225 146 aa34.13■■■■□ 3.05
HOMER3-202ENST00000392351 FAM98CQ17RN3 349 aaKnown RBP34.12■■■■□ 3.05
HOMER3-202ENST00000392351 USHBP1Q8N6Y0 703 aa34.12■■■■□ 3.05
HOMER3-202ENST00000392351 EYA1Q99502 592 aa34.12■■■■□ 3.05
HOMER3-202ENST00000392351 THRAP3Q9Y2W1 955 aaKnown RBP34.12■■■■□ 3.05
HOMER3-202ENST00000392351 BARGINQ6ZT62 677 aa34.09■■■■□ 3.05
HOMER3-202ENST00000392351 THSD7AQ9UPZ6 1657 aa34.08■■■■□ 3.05
HOMER3-202ENST00000392351 IGSF1Q8N6C5 1336 aa34.07■■■■□ 3.04
HOMER3-202ENST00000392351 NCAPD2Q15021 1401 aa34.07■■■■□ 3.04
HOMER3-202ENST00000392351 SOCS7O14512 581 aa34.06■■■■□ 3.04
HOMER3-202ENST00000392351 A0A0G2JS52 829 aa34.06■■■■□ 3.04
HOMER3-202ENST00000392351 MYT1Q01538 1121 aa34.06■■■■□ 3.04
HOMER3-202ENST00000392351 PARP4Q9UKK3 1724 aaKnown RBP34.04■■■■□ 3.04
HOMER3-202ENST00000392351 DISP2A7MBM2 1401 aa34.04■■■■□ 3.04
HOMER3-202ENST00000392351 RGS12O14924 1447 aa34.04■■■■□ 3.04
HOMER3-202ENST00000392351 U2SURPO15042 1029 aaKnown RBP34.03■■■■□ 3.04
HOMER3-202ENST00000392351 ONECUT3O60422 494 aaPredicted RBP34.03■■■■□ 3.04
HOMER3-202ENST00000392351 NUDCQ9Y266 331 aa34.02■■■■□ 3.04
HOMER3-202ENST00000392351 BRWD3Q6RI45 1802 aa34.01■■■■□ 3.04
HOMER3-202ENST00000392351 IL2RBP14784 551 aa34.01■■■■□ 3.03
HOMER3-202ENST00000392351 MEGF6O75095 1541 aa34■■■■□ 3.03
HOMER3-202ENST00000392351 LRRC37A3O60309 1634 aa34■■■■□ 3.03
HOMER3-202ENST00000392351 SEPT12Q8IYM1 358 aa34■■■■□ 3.03
HOMER3-202ENST00000392351 CDCA7Q9BWT1 371 aaPredicted RBP33.99■■■■□ 3.03
HOMER3-202ENST00000392351 SULT6B1Q6IMI4 303 aa33.98■■■■□ 3.03
HOMER3-202ENST00000392351 AEBP1Q8IUX7 1158 aa33.98■■■■□ 3.03
HOMER3-202ENST00000392351 RAPGEF4Q8WZA2 1011 aa33.98■■■■□ 3.03
HOMER3-202ENST00000392351 KDRP35968 1356 aa33.97■■■■□ 3.03
HOMER3-202ENST00000392351 HMOX1P09601 288 aa33.96■■■■□ 3.03
HOMER3-202ENST00000392351 CCDC184Q52MB2 194 aa33.95■■■■□ 3.03
HOMER3-202ENST00000392351 U2AF1L5P0DN76 240 aaPredicted RBP33.94■■■■□ 3.02
HOMER3-202ENST00000392351 U2AF1Q01081 240 aaKnown RBP eCLIP33.94■■■■□ 3.02
HOMER3-202ENST00000392351 OVOS2A0A0G2JMS6 1433 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms