RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PCDHGA10Q9Y5H3 936 aa0.28□□□□□ -2.36
TRAJ28-201ENST00000390509 PLEKHG3A1L390 1219 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 ZBTB22O15209 634 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 SIAH2O43255 324 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 FOXD2O60548 495 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 WNT11O96014 354 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 CFHP08603 1231 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 ZSCAN22P10073 491 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 HOXB4P17483 251 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 SPINK2P20155 84 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 MX2P20592 715 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 TGM1P22735 817 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 RAP1GAPP47736 663 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 HMGA2P52926 109 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 KRTAP10-2P60368 255 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 SKOR1P84550 965 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 CBLBQ13191 982 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 NNTQ13423 1086 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 ZXDCQ2QGD7 858 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 NBPF20Q3BBV1 942 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 LRCH2Q5VUJ6 765 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 ERICH6BQ5W0A0 696 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 NBPF10Q6P3W6 841 aaKnown RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 SLCO4C1Q6ZQN7 724 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 PRRT2Q7Z6L0 340 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 C1QL4Q86Z23 238 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 MEIOBQ8N635 442 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 GOLGA6L1Q8N7Z2 621 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 EHBP1Q8NDI1 1231 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 BHLHE22Q8NFJ8 381 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 EDARADDQ8WWZ3 215 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 TP53INP1Q96A56 240 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 GMCL1Q96IK5 515 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 BRIP1Q9BX63 1249 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 SLITRK6Q9H5Y7 841 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 GPHNQ9NQX3 736 aaPredicted RBP0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 PNMA3Q9UL41 463 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 GPR98Q8WXG9 6306 aa0.27□□□□□ -2.37
TRAJ28-201ENST00000390509 AHNAKQ09666 5890 aaKnown RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 MUC19Q7Z5P9 8384 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 C9orf172C9J069 976 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ATP5J2-PTCD1G3V325 749 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 GPR25O00155 361 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PTCD1O75127 700 aaKnown RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ZIC2O95409 532 aaPredicted RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 FMNL1O95466 1100 aaPredicted RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ITGB6P18564 788 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 FSTP19883 344 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 HOXA5P20719 270 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 LMO1P25800 156 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CFPP27918 469 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 GRNP28799 593 aaKnown RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 GRIK1P39086 918 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PRSS12P56730 875 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 NFKB2Q00653 900 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 NRG1Q02297 640 aaPredicted RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PUM1Q14671 1186 aaKnown RBP eCLIP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 MBTPS1Q14703 1052 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CSRP2Q16527 193 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 MSS51Q4VC12 460 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CRB2Q5IJ48 1285 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 INTS5Q6P9B9 1019 aaKnown RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CBLL1Q75N03 491 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 TXNRD3Q86VQ6 643 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CILP2Q8IUL8 1156 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 SCUBE3Q8IX30 993 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 TRIM22Q8IYM9 498 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ABI1Q8IZP0 508 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ZNF837Q96EG3 531 aaPredicted RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 CDCA7LQ96GN5 454 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 SORCS2Q96PQ0 1159 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PPP1R16BQ96T49 567 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 TSEN34Q9BSV6 310 aaKnown RBP0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PLVAPQ9BX97 442 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 MFRPQ9BY79 579 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 ZFAND3Q9H8U3 227 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 PRDM9Q9NQV7 894 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM53CQ9NYF3 392 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 TNFRSF18Q9Y5U5 241 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 TLL2Q9Y6L7 1015 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 SALL3Q9BXA9 1300 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 NOTCH2Q04721 2471 aa0.26□□□□□ -2.37
TRAJ28-201ENST00000390509 FIGNL2A6NMB9 653 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 BIN1O00499 593 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 SPTLC1O15269 473 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 GRIN3BO60391 1043 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ADAMTS4O75173 837 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 MED26O95402 600 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 TSPAN15O95858 294 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 EPXP11678 715 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ZXDAP98168 799 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 TRIM28Q13263 835 aaKnown RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ADGRE1Q14246 886 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 NFIXQ14938 502 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ECM1Q16610 540 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 CDCP2Q5VXM1 449 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 NUDT18Q6ZVK8 323 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 AMIGO3Q86WK7 504 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ANKLE2Q86XL3 938 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 DTX1Q86Y01 620 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms