RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SAFBQ15424 915 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKP4-201ENST00000389757 USHBP1Q8N6Y0 703 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
PKP4-201ENST00000389757 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 BCAR3O75815 825 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 TOM1O60784 492 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
PKP4-201ENST00000389757 SART3Q15020 963 aaKnown RBP12.42□□□□□ -0.42
PKP4-201ENST00000389757 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
PKP4-201ENST00000389757 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 SMC3Q9UQE7 1217 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 PSMA5P28066 241 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 SIL1Q9H173 461 aa12.42□□□□□ -0.42
PKP4-201ENST00000389757 EXOC5O00471 708 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 PES1O00541 588 aaKnown RBP12.41□□□□□ -0.42
PKP4-201ENST00000389757 MCM10Q7L590 875 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■□□ 14.6
PKP4-201ENST00000389757 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
PKP4-201ENST00000389757 CCDC47Q96A33 483 aaKnown RBP12.41□□□□□ -0.42
PKP4-201ENST00000389757 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 ITSN2Q9NZM3 1697 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 ACEP12821 1306 aa12.41□□□□□ -0.42
PKP4-201ENST00000389757 WDR62O43379 1518 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
PKP4-201ENST00000389757 DDX49Q9Y6V7 483 aaKnown RBP12.4□□□□□ -0.42
PKP4-201ENST00000389757 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 IKQ13123 557 aaPredicted RBP12.4□□□□□ -0.42
PKP4-201ENST00000389757 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
PKP4-201ENST00000389757 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 CCDC43Q96MW1 224 aaKnown RBP12.4□□□□□ -0.42
PKP4-201ENST00000389757 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 LRRCC1Q9C099 1032 aa12.4□□□□□ -0.42
PKP4-201ENST00000389757 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 ZPR1O75312 459 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 NSD2O96028 1365 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
PKP4-201ENST00000389757 MTMR7Q9Y216 660 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 TPM2P07951 284 aa12.39□□□□□ -0.43
PKP4-201ENST00000389757 XBP1P17861 261 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
PKP4-201ENST00000389757 NPHP3Q7Z494 1330 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 BECN2A8MW95 431 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 IFT57Q9NWB7 429 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 MVPQ14764 893 aaKnown RBP12.38□□□□□ -0.43
PKP4-201ENST00000389757 CEP89Q96ST8 783 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 NUP160Q12769 1436 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
PKP4-201ENST00000389757 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
PKP4-201ENST00000389757 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
PKP4-201ENST00000389757 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
PKP4-201ENST00000389757 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
PKP4-201ENST00000389757 NACAP1Q9BZK3 213 aa12.37□□□□□ -0.43
PKP4-201ENST00000389757 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
PKP4-201ENST00000389757 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
PKP4-201ENST00000389757 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
PKP4-201ENST00000389757 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
PKP4-201ENST00000389757 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
PKP4-201ENST00000389757 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
PKP4-201ENST00000389757 FOSBP53539 338 aa12.36□□□□□ -0.43
PKP4-201ENST00000389757 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
PKP4-201ENST00000389757 TPM3P06753 285 aa12.36□□□□□ -0.43
PKP4-201ENST00000389757 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
PKP4-201ENST00000389757 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
PKP4-201ENST00000389757 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 AACSQ86V21 672 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 ANKRD24Q8TF21 1146 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
PKP4-201ENST00000389757 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
PKP4-201ENST00000389757 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 HSPA2P54652 639 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 NUCB2P80303 420 aa12.35□□□□□ -0.43
PKP4-201ENST00000389757 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
PKP4-201ENST00000389757 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
PKP4-201ENST00000389757 CCDC184Q52MB2 194 aa12.34□□□□□ -0.43
PKP4-201ENST00000389757 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
PKP4-201ENST00000389757 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
PKP4-201ENST00000389757 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
PKP4-201ENST00000389757 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
PKP4-201ENST00000389757 TPM1P09493 284 aa12.34□□□□□ -0.43
PKP4-201ENST00000389757 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
PKP4-201ENST00000389757 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
PKP4-201ENST00000389757 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
PKP4-201ENST00000389757 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
PKP4-201ENST00000389757 ANKRD20A12PQ8NF67 263 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms