RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 R3HCC1Q9Y3T6 440 aaKnown RBP19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
PTPRN2-201ENST00000389413 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
PTPRN2-201ENST00000389413 EMILIN1Q9Y6C2 1016 aa19.41■□□□□ 0.7
PTPRN2-201ENST00000389413 HIP1O00291 1037 aa19.41■□□□□ 0.7
PTPRN2-201ENST00000389413 NME9Q86XW9 330 aa19.41■□□□□ 0.7
PTPRN2-201ENST00000389413 ANKRD36BQ8N2N9 1353 aa19.4■□□□□ 0.7
PTPRN2-201ENST00000389413 PDCP20941 246 aa19.4■□□□□ 0.7
PTPRN2-201ENST00000389413 WDR33Q9C0J8 1336 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-201ENST00000389413 NLRP2Q9NX02 1062 aa19.4■□□□□ 0.7
PTPRN2-201ENST00000389413 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
PTPRN2-201ENST00000389413 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.7
PTPRN2-201ENST00000389413 TULP1O00294 542 aaPredicted RBP19.39■□□□□ 0.7
PTPRN2-201ENST00000389413 MCM10Q7L590 875 aa19.39■□□□□ 0.7
PTPRN2-201ENST00000389413 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.7
PTPRN2-201ENST00000389413 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.69
PTPRN2-201ENST00000389413 CCDC73Q6ZRK6 1079 aa19.39■□□□□ 0.69
PTPRN2-201ENST00000389413 SPATA31E1Q6ZUB1 1445 aa19.39■□□□□ 0.69
PTPRN2-201ENST00000389413 SYNE3Q6ZMZ3 975 aa19.39■□□□□ 0.69
PTPRN2-201ENST00000389413 NEUROD6Q96NK8 337 aa19.39■□□□□ 0.69
PTPRN2-201ENST00000389413 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
PTPRN2-201ENST00000389413 ESPNB1AK53 854 aa19.38■□□□□ 0.69
PTPRN2-201ENST00000389413 GCC2Q8IWJ2 1684 aa19.38■□□□□ 0.69
PTPRN2-201ENST00000389413 TRDNQ13061 729 aa19.38■□□□□ 0.69
PTPRN2-201ENST00000389413 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
PTPRN2-201ENST00000389413 FIBPO43427 364 aa19.37■□□□□ 0.69
PTPRN2-201ENST00000389413 TPM2P07951 284 aa19.37■□□□□ 0.69
PTPRN2-201ENST00000389413 EXOC6BQ9Y2D4 811 aa19.37■□□□□ 0.69
PTPRN2-201ENST00000389413 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 TRAPPC8Q9Y2L5 1435 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 TRIM29Q14134 588 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 THEMISQ8N1K5 641 aaPredicted RBP19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 WASLO00401 505 aaPredicted RBP19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 RASSF8Q8NHQ8 419 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
PTPRN2-201ENST00000389413 APPP05067 770 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 TPM3P06753 285 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 EVA1CP58658 441 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 ESCO1Q5FWF5 840 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 A2MP01023 1474 aa19.35■□□□□ 0.69
PTPRN2-201ENST00000389413 SMARCA5O60264 1052 aaPredicted RBP19.34■□□□□ 0.69
PTPRN2-201ENST00000389413 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
PTPRN2-201ENST00000389413 FBXO31Q5XUX0 539 aaPredicted RBP19.34■□□□□ 0.69
PTPRN2-201ENST00000389413 ZNF530Q6P9A1 599 aaPredicted RBP19.34■□□□□ 0.69
PTPRN2-201ENST00000389413 TNPO1Q92973 898 aaKnown RBP19.34■□□□□ 0.69
PTPRN2-201ENST00000389413 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.69
PTPRN2-201ENST00000389413 FYB1O15117 783 aa19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 TBC1D9Q6ZT07 1266 aa19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 CREBRFQ8IUR6 639 aa19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 ARHGAP45Q92619 1136 aa19.33■□□□□ 0.68
PTPRN2-201ENST00000389413 MX1P20591 662 aa19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 FOSBP53539 338 aa19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 INSRP06213 1382 aa19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 NUCB1Q02818 461 aa19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 MBIPQ9NS73 344 aa19.32■□□□□ 0.68
PTPRN2-201ENST00000389413 NPC1L1Q9UHC9 1359 aa19.31■□□□□ 0.68
PTPRN2-201ENST00000389413 RALYLQ86SE5 291 aaKnown RBP19.31■□□□□ 0.68
PTPRN2-201ENST00000389413 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
PTPRN2-201ENST00000389413 WASHC4Q2M389 1173 aa19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 RLBP1P12271 317 aa19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 PTPRCP08575 1304 aa19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 ANKRD1Q15327 319 aa19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 MTERF4Q7Z6M4 381 aaKnown RBP19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 DNAJC2Q99543 621 aaKnown RBP19.3■□□□□ 0.68
PTPRN2-201ENST00000389413 SSFA2P28290 1259 aa19.29■□□□□ 0.68
PTPRN2-201ENST00000389413 TPD52L1Q16890 204 aaPredicted RBP19.29■□□□□ 0.68
PTPRN2-201ENST00000389413 ATF3P18847 181 aa19.29■□□□□ 0.68
PTPRN2-201ENST00000389413 SDF4Q9BRK5 362 aa19.29■□□□□ 0.68
PTPRN2-201ENST00000389413 CWC27Q6UX04 472 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-201ENST00000389413 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
PTPRN2-201ENST00000389413 ZMYM4Q5VZL5 1548 aa19.28■□□□□ 0.68
PTPRN2-201ENST00000389413 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
PTPRN2-201ENST00000389413 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
PTPRN2-201ENST00000389413 NFXL1Q6ZNB6 911 aa19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 NAT10Q9H0A0 1025 aaKnown RBP19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 HOOK1Q9UJC3 728 aaKnown RBP19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 F6X3S4 739 aa19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 KIF1BPQ96EK5 621 aa19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 NUTM1Q86Y26 1132 aa19.27■□□□□ 0.68
PTPRN2-201ENST00000389413 KRT85P78386 507 aa19.27■□□□□ 0.67
PTPRN2-201ENST00000389413 RAB11FIP3O75154 756 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 CCDC192P0DO97 292 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 AACSQ86V21 672 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 FBXW7Q969H0 707 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 LARP1BQ659C4 914 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms