RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 STK38Q15208 465 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 NUTM2GQ5VZR2 741 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 IGHDP01880 384 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 TRIM27P14373 513 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
NCBP3-201ENST00000389005 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
NCBP3-201ENST00000389005 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-201ENST00000389005 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
NCBP3-201ENST00000389005 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
NCBP3-201ENST00000389005 CWC15Q9P013 229 aaKnown RBP9.5□□□□□ -0.89
NCBP3-201ENST00000389005 DHX16O60231 1041 aaKnown RBP9.5□□□□□ -0.89
NCBP3-201ENST00000389005 ARHGEF11O15085 1522 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 CEP89Q96ST8 783 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 NUP62CLQ9H1M0 184 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 BMP2KLQ5H9B9 411 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 AK7Q96M32 723 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 UPF3BQ9BZI7 483 aaKnown RBP9.5□□□□□ -0.89
NCBP3-201ENST00000389005 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 JAKMIP1Q96N16 626 aaKnown RBP9.5□□□□□ -0.89
NCBP3-201ENST00000389005 ERICH2A1L162 156 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 ME1P48163 572 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 DHX8Q14562 1220 aaKnown RBP9.5□□□□□ -0.89
NCBP3-201ENST00000389005 PDRG1Q9NUG6 133 aa9.5□□□□□ -0.89
NCBP3-201ENST00000389005 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 MAGI1Q96QZ7 1491 aaPredicted RBP9.49□□□□□ -0.89
NCBP3-201ENST00000389005 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 MAP4K4O95819 1239 aaPredicted RBP9.49□□□□□ -0.89
NCBP3-201ENST00000389005 VPS53Q5VIR6 699 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 PPP6R1Q9UPN7 881 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 STK3Q13188 491 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 DNAJC2Q99543 621 aaKnown RBP9.49□□□□□ -0.89
NCBP3-201ENST00000389005 EXOC6BQ9Y2D4 811 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 RUFY1Q96T51 708 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 BLOC1S2Q6QNY1 142 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 IL1RAPL2Q9NP60 686 aa9.49□□□□□ -0.89
NCBP3-201ENST00000389005 MX1P20591 662 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 CEP57L1Q8IYX8 460 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 SRGAP3O43295 1099 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
NCBP3-201ENST00000389005 CWC27Q6UX04 472 aaKnown RBP9.48□□□□□ -0.89
NCBP3-201ENST00000389005 PDCL2Q8N4E4 241 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
NCBP3-201ENST00000389005 CCDC183Q5T5S1 534 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 JMYQ8N9B5 988 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 DHX29Q7Z478 1369 aaKnown RBP9.48□□□□□ -0.89
NCBP3-201ENST00000389005 PDIA4P13667 645 aaKnown RBP9.48□□□□□ -0.89
NCBP3-201ENST00000389005 MAP3K11Q16584 847 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
NCBP3-201ENST00000389005 RTEL1-TNFRSF6BF6WH68 1400 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 CASTP20810 708 aaKnown RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 ERCC4Q92889 916 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 AACSQ86V21 672 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 RALGAPBQ86X10 1494 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
NCBP3-201ENST00000389005 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 MCM5P33992 734 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 CLCN1P35523 988 aa9.47□□□□□ -0.89
NCBP3-201ENST00000389005 PLEKHH1Q9ULM0 1364 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 ATP2B1P20020 1258 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 TTLL5Q6EMB2 1281 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 CFAP45Q9UL16 551 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 NAP1L1P55209 391 aaKnown RBP9.46□□□□□ -0.89
NCBP3-201ENST00000389005 SERPINC1P01008 464 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 PDCL3Q9H2J4 239 aa9.46□□□□□ -0.89
NCBP3-201ENST00000389005 SART3Q15020 963 aaKnown RBP9.46□□□□□ -0.9
NCBP3-201ENST00000389005 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 CAGE1Q8TC20 777 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-201ENST00000389005 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 FILIP1Q7Z7B0 1213 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 FERMT3Q86UX7 667 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 TMX4Q9H1E5 349 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-201ENST00000389005 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
NCBP3-201ENST00000389005 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 VPS37DQ86XT2 251 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 SIL1Q9H173 461 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 XBP1P17861 261 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
NCBP3-201ENST00000389005 AMOTL1Q8IY63 956 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 NOL10Q9BSC4 688 aaKnown RBP9.45□□□□□ -0.9
NCBP3-201ENST00000389005 SH2B1Q9NRF2 756 aaPredicted RBP9.45□□□□□ -0.9
NCBP3-201ENST00000389005 KDM4AO75164 1064 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
NCBP3-201ENST00000389005 KRT32Q14532 448 aa9.44□□□□□ -0.9
NCBP3-201ENST00000389005 ZNF530Q6P9A1 599 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms