RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ZFYVE27Q5T4F4 411 aa14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 FAM177BA6PVY3 158 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 KDM4AO75164 1064 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 NEK4P51957 841 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 TRIM22Q8IYM9 498 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 THEMISQ8N1K5 641 aaPredicted RBP14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 TSPY26PQ9H489 355 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
KCNQ3-201ENST00000388996 CABP4P57796 275 aa14.65□□□□□ -0.07
KCNQ3-201ENST00000388996 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.07
KCNQ3-201ENST00000388996 ATP2B1P20020 1258 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 FIBPO43427 364 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 CAVIN1Q6NZI2 390 aaKnown RBP14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 AKNAQ7Z591 1439 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 STIM1Q13586 685 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 MPHOSPH8Q99549 860 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 SPG7Q9UQ90 795 aa14.64□□□□□ -0.07
KCNQ3-201ENST00000388996 SLC52A1Q9NWF4 448 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 SMARCE1Q969G3 411 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 TTLL5Q6EMB2 1281 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 PNISRQ8TF01 805 aaKnown RBP14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 ANKRD1Q15327 319 aa14.63□□□□□ -0.07
KCNQ3-201ENST00000388996 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
KCNQ3-201ENST00000388996 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
KCNQ3-201ENST00000388996 CYP46A1Q9Y6A2 500 aa14.62□□□□□ -0.07
KCNQ3-201ENST00000388996 WWC2Q6AWC2 1192 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 LRRCC1Q9C099 1032 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 NSD3Q9BZ95 1437 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 PRDM11Q9NQV5 511 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 DCTN1Q14203 1278 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 CABP1Q9NZU7 370 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 SIL1Q9H173 461 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 RNF214Q8ND24 703 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 MRE11P49959 708 aa14.61□□□□□ -0.07
KCNQ3-201ENST00000388996 SRCIN1Q9C0H9 1055 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 RPGRIP1LQ68CZ1 1315 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 FILIP1LQ4L180 1135 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 ARHGEF11O15085 1522 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 CDKL5O76039 1030 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 AACSQ86V21 672 aa14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 ZNHIT6Q9NWK9 470 aaKnown RBP14.6□□□□□ -0.07
KCNQ3-201ENST00000388996 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 CCDC57Q2TAC2 916 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 WDR63Q8IWG1 891 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 SYCP1Q15431 976 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
KCNQ3-201ENST00000388996 CCDC69A6NI79 296 aa14.58□□□□□ -0.07
KCNQ3-201ENST00000388996 ME1P48163 572 aa14.58□□□□□ -0.07
KCNQ3-201ENST00000388996 CEBPZQ03701 1054 aaKnown RBP14.58□□□□□ -0.07
KCNQ3-201ENST00000388996 NFKBIBQ15653 356 aa14.58□□□□□ -0.07
KCNQ3-201ENST00000388996 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.07
KCNQ3-201ENST00000388996 ERCC4Q92889 916 aaPredicted RBP14.58□□□□□ -0.08
KCNQ3-201ENST00000388996 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
KCNQ3-201ENST00000388996 LUC7LQ9NQ29 371 aaKnown RBP14.58□□□□□ -0.08
KCNQ3-201ENST00000388996 DHX8Q14562 1220 aaKnown RBP14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 FMNL2Q96PY5 1086 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 ANKLE2Q86XL3 938 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 ZSCAN25Q6NSZ9 544 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 CCDC192P0DO97 292 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 MYL6BP14649 208 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 TXLNBQ8N3L3 684 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 TNMDQ9H2S6 317 aa14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
KCNQ3-201ENST00000388996 WDR33Q9C0J8 1336 aaKnown RBP14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 PAF1Q8N7H5 531 aa14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 BTBD11A6QL63 1104 aa14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 TDO2P48775 406 aa14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 SLC12A5Q9H2X9 1139 aa14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 CWC15Q9P013 229 aaKnown RBP14.56□□□□□ -0.08
KCNQ3-201ENST00000388996 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
KCNQ3-201ENST00000388996 RBM5P52756 815 aaKnown RBP eCLIP14.55□□□□□ -0.08
KCNQ3-201ENST00000388996 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
KCNQ3-201ENST00000388996 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
KCNQ3-201ENST00000388996 ERLIN2O94905 339 aa14.55□□□□□ -0.08
KCNQ3-201ENST00000388996 PRXQ9BXM0 1461 aa14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 CTNNA3Q9UI47 895 aa14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 TRAK2O60296 914 aa14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 MTERF4Q7Z6M4 381 aaKnown RBP14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 STK3Q13188 491 aa14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 NUP133Q8WUM0 1156 aa14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
KCNQ3-201ENST00000388996 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
KCNQ3-201ENST00000388996 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
KCNQ3-201ENST00000388996 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
KCNQ3-201ENST00000388996 DACH1Q9UI36 760 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms