RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
RNU1-39P-201ENST00000383897 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
RNU1-39P-201ENST00000383897 ATP13A2Q9NQ11 1180 aa7.27□□□□□ -1.25
RNU1-39P-201ENST00000383897 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.25
RNU1-39P-201ENST00000383897 PCDHB9Q9Y5E1 797 aa7.27□□□□□ -1.25
RNU1-39P-201ENST00000383897 SOCS7O14512 581 aa7.26□□□□□ -1.25
RNU1-39P-201ENST00000383897 ZIC2O95409 532 aaPredicted RBP7.26□□□□□ -1.25
RNU1-39P-201ENST00000383897 ABL2P42684 1182 aa7.26□□□□□ -1.25
RNU1-39P-201ENST00000383897 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
RNU1-39P-201ENST00000383897 INTS6LQ5JSJ4 861 aaKnown RBP7.25□□□□□ -1.25
RNU1-39P-201ENST00000383897 CCDC116Q8IYX3 515 aa7.25□□□□□ -1.25
RNU1-39P-201ENST00000383897 NR1H3Q13133 447 aa7.24□□□□□ -1.25
RNU1-39P-201ENST00000383897 NBPF20Q3BBV1 942 aa7.24□□□□□ -1.25
RNU1-39P-201ENST00000383897 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
RNU1-39P-201ENST00000383897 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
RNU1-39P-201ENST00000383897 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
RNU1-39P-201ENST00000383897 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
RNU1-39P-201ENST00000383897 KLF16Q9BXK1 252 aaPredicted RBP7.23□□□□□ -1.25
RNU1-39P-201ENST00000383897 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 VAC14Q08AM6 782 aa7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 IRF5Q13568 498 aa7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 TMPRSS4Q9NRS4 437 aa7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
RNU1-39P-201ENST00000383897 GIGYF1O75420 1035 aaPredicted RBP7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 CBLBQ13191 982 aa7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 C6orf118Q5T5N4 469 aa7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 MRPL14Q6P1L8 145 aaKnown RBP7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
RNU1-39P-201ENST00000383897 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
RNU1-39P-201ENST00000383897 SNRPBP14678 240 aaKnown RBP7.2□□□□□ -1.26
RNU1-39P-201ENST00000383897 DHX9Q08211 1270 aaKnown RBP7.2□□□□□ -1.26
RNU1-39P-201ENST00000383897 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
RNU1-39P-201ENST00000383897 ZNF330Q9Y3S2 320 aaPredicted RBP7.2□□□□□ -1.26
RNU1-39P-201ENST00000383897 ZNF784Q8NCA9 323 aaPredicted RBP7.19□□□□□ -1.26
RNU1-39P-201ENST00000383897 ZFP42Q96MM3 310 aa7.19□□□□□ -1.26
RNU1-39P-201ENST00000383897 ESPNB1AK53 854 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 UBTFP17480 764 aaKnown RBP7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 FLIIQ13045 1269 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 SCARF1Q14162 830 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 MEIOBQ8N635 442 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 SENP2Q9HC62 589 aa7.18□□□□□ -1.26
RNU1-39P-201ENST00000383897 UPP2O95045 317 aa7.17□□□□□ -1.26
RNU1-39P-201ENST00000383897 BMP2P12643 396 aa7.17□□□□□ -1.26
RNU1-39P-201ENST00000383897 AGBL1Q96MI9 1066 aa7.17□□□□□ -1.26
RNU1-39P-201ENST00000383897 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
RNU1-39P-201ENST00000383897 SOBPA7XYQ1 873 aa7.16□□□□□ -1.26
RNU1-39P-201ENST00000383897 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
RNU1-39P-201ENST00000383897 RAD21O60216 631 aa7.15□□□□□ -1.26
RNU1-39P-201ENST00000383897 EIF4G2P78344 907 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU1-39P-201ENST00000383897 RELBQ01201 579 aa7.15□□□□□ -1.26
RNU1-39P-201ENST00000383897 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
RNU1-39P-201ENST00000383897 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
RNU1-39P-201ENST00000383897 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
RNU1-39P-201ENST00000383897 ZNF775Q96BV0 537 aaPredicted RBP7.14□□□□□ -1.27
RNU1-39P-201ENST00000383897 CEP126Q9P2H0 1117 aa7.14□□□□□ -1.27
RNU1-39P-201ENST00000383897 PCDHB11Q9Y5F2 797 aa7.14□□□□□ -1.27
RNU1-39P-201ENST00000383897 LILRA1O75019 489 aa7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 MCCD1P59942 119 aaPredicted RBP7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 RNF20Q5VTR2 975 aa7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 Q6ZVU0 165 aa7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 TSEN34Q9BSV6 310 aaKnown RBP7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 ZNF395Q9H8N7 513 aaPredicted RBP7.13□□□□□ -1.27
RNU1-39P-201ENST00000383897 ADH1AP07327 375 aa7.12□□□□□ -1.27
RNU1-39P-201ENST00000383897 SCTRP47872 440 aa7.12□□□□□ -1.27
RNU1-39P-201ENST00000383897 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
RNU1-39P-201ENST00000383897 SLFNL1Q499Z3 407 aa7.11□□□□□ -1.27
RNU1-39P-201ENST00000383897 WWC1Q8IX03 1113 aa7.11□□□□□ -1.27
RNU1-39P-201ENST00000383897 CCDC85AQ96PX6 553 aaPredicted RBP7.11□□□□□ -1.27
RNU1-39P-201ENST00000383897 POM121CA8CG34 1229 aa7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 MAN1A2O60476 641 aa7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 TSGA10IPQ3SY00 556 aa7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 RNF135Q8IUD6 432 aa7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 INSM2Q96T92 566 aaPredicted RBP7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 CDCA7Q9BWT1 371 aaPredicted RBP7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 POLMQ9NP87 494 aaPredicted RBP7.1□□□□□ -1.27
RNU1-39P-201ENST00000383897 FIGNL2A6NMB9 653 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 TTLL8A6PVC2 850 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 CC2D2BQ6DHV5 1058 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 DNMT3LQ9UJW3 386 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 DOLKQ9UPQ8 538 aa7.09□□□□□ -1.27
RNU1-39P-201ENST00000383897 SOS2Q07890 1332 aaPredicted RBP7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 ATP5J2-PTCD1G3V325 749 aa7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 SPINT1O43278 529 aa7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 CTSOP43234 321 aaPredicted RBP7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 VEGFBP49765 207 aa7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 KDF1Q8NAX2 398 aaPredicted RBP7.08□□□□□ -1.28
RNU1-39P-201ENST00000383897 PTGIRP43119 386 aa7.07□□□□□ -1.28
RNU1-39P-201ENST00000383897 PROSER2Q86WR7 435 aaPredicted RBP7.07□□□□□ -1.28
RNU1-39P-201ENST00000383897 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
RNU1-39P-201ENST00000383897 MEN1O00255 615 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms