RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 GTF2E1P29083 439 aaPredicted RBP14.64□□□□□ -0.07
SRGAP3-202ENST00000383836 EPB41L2O43491 1005 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 UBTFL1P0CB47 393 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 ARHGAP29Q52LW3 1261 aa14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 SFPQP23246 707 aaKnown RBP eCLIP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 MAP2K1Q02750 393 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 CCDC183Q5T5S1 534 aa14.63□□□□□ -0.07
SRGAP3-202ENST00000383836 CDCA7LQ96GN5 454 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 GOLGA6L10A0A0M3HER8 536 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 FSD1Q9BTV5 496 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 JAKMIP3Q5VZ66 844 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 LARP1BQ659C4 914 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 RAD21O60216 631 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 FHOD3Q2V2M9 1422 aa14.62□□□□□ -0.07
SRGAP3-202ENST00000383836 KIAA1328Q86T90 577 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 VPS37DQ86XT2 251 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 LUZP1Q86V48 1076 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 MNAT1P51948 309 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 TNNT1P13805 278 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 GTPBP4Q9BZE4 634 aaKnown RBP14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
SRGAP3-202ENST00000383836 RBM25P49756 843 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 CDK5RAP3Q96JB5 506 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 KIF5CO60282 957 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 WASHC4Q2M389 1173 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 CLCN1P35523 988 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 STAC3Q96MF2 364 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 DNAAF4Q8WXU2 420 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 KRT222Q8N1A0 295 aa14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 C16orf45Q96MC5 204 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-202ENST00000383836 MLECQ14165 292 aa14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 TTC5Q8N0Z6 440 aa14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 PAXBP1Q9Y5B6 917 aa14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 RNF187Q5TA31 235 aaPredicted RBP14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 NEMFO60524 1076 aa14.59□□□□□ -0.07
SRGAP3-202ENST00000383836 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.07
SRGAP3-202ENST00000383836 IBSPP21815 317 aaPredicted RBP14.58□□□□□ -0.07
SRGAP3-202ENST00000383836 IVLP07476 585 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 NF2P35240 595 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 CFAP100Q494V2 611 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 GNAI3P08754 354 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 LMAN1P49257 510 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 CHD1LQ86WJ1 897 aa14.58□□□□□ -0.08
SRGAP3-202ENST00000383836 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
SRGAP3-202ENST00000383836 KIF3BO15066 747 aa14.57□□□□□ -0.08
SRGAP3-202ENST00000383836 EFCAB2Q5VUJ9 269 aa14.57□□□□□ -0.08
SRGAP3-202ENST00000383836 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
SRGAP3-202ENST00000383836 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
SRGAP3-202ENST00000383836 URI1O94763 535 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 CTDP1Q9Y5B0 961 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 PLEKHH1Q9ULM0 1364 aa14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 NEUROD6Q96NK8 337 aa14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 ERC1Q8IUD2 1116 aa14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-202ENST00000383836 NUTM2DQ5VT03 806 aaPredicted RBP14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 PLEKHH2Q8IVE3 1493 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 SMARCC1Q92922 1105 aaPredicted RBP14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 ZSCAN31Q96LW9 406 aaPredicted RBP14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 CUL7Q14999 1698 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 ATP2B1P20020 1258 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 CAMK4Q16566 473 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 STK3Q13188 491 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
SRGAP3-202ENST00000383836 GNAI2P04899 355 aa14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 TAF4BQ92750 862 aa14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 GSDMDP57764 484 aa14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
SRGAP3-202ENST00000383836 KDM4AO75164 1064 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 BCAR3O75815 825 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 TANGO6Q9C0B7 1094 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 SPATA24Q86W54 205 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 ANO10Q9NW15 660 aa14.53□□□□□ -0.08
SRGAP3-202ENST00000383836 CEP135Q66GS9 1140 aa14.52□□□□□ -0.08
SRGAP3-202ENST00000383836 ADCY5O95622 1261 aa14.52□□□□□ -0.08
SRGAP3-202ENST00000383836 CCDC175P0C221 793 aa14.52□□□□□ -0.08
SRGAP3-202ENST00000383836 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.08
SRGAP3-202ENST00000383836 TRIM22Q8IYM9 498 aa14.52□□□□□ -0.08
SRGAP3-202ENST00000383836 TNPO1Q92973 898 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-202ENST00000383836 PDRG1Q9NUG6 133 aa14.52□□□□□ -0.09
SRGAP3-202ENST00000383836 CCDC83Q8IWF9 413 aa14.52□□□□□ -0.09
SRGAP3-202ENST00000383836 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.09
SRGAP3-202ENST00000383836 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms