RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 DYNC1I1O14576 645 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 MCCP23508 829 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 PTPRTO14522 1441 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 NOS1P29475 1434 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
SHOX-203ENST00000381578 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
SHOX-203ENST00000381578 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
SHOX-203ENST00000381578 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
SHOX-203ENST00000381578 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
SHOX-203ENST00000381578 NPHP1O15259 732 aa14.81□□□□□ -0.04
SHOX-203ENST00000381578 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
SHOX-203ENST00000381578 CGNQ9P2M7 1197 aaKnown RBP14.81□□□□□ -0.04
SHOX-203ENST00000381578 TET3O43151 1660 aa14.81□□□□□ -0.04
SHOX-203ENST00000381578 TRPM2O94759 1503 aa14.81□□□□□ -0.04
SHOX-203ENST00000381578 NPATQ14207 1427 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 GPRASP1Q5JY77 1395 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 SNX21Q969T3 373 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 E9PCH4 1651 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 PHF14O94880 888 aa14.8□□□□□ -0.04
SHOX-203ENST00000381578 NOL7Q9UMY1 257 aaKnown RBP14.8□□□□□ -0.04
SHOX-203ENST00000381578 FIBPO43427 364 aa14.79□□□□□ -0.04
SHOX-203ENST00000381578 DTNBO60941 627 aa14.79□□□□□ -0.04
SHOX-203ENST00000381578 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
SHOX-203ENST00000381578 PDCL2Q8N4E4 241 aa14.79□□□□□ -0.04
SHOX-203ENST00000381578 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
SHOX-203ENST00000381578 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
SHOX-203ENST00000381578 NUCB1Q02818 461 aa14.79□□□□□ -0.04
SHOX-203ENST00000381578 LARP6Q9BRS8 491 aaKnown RBP14.79□□□□□ -0.04
SHOX-203ENST00000381578 UPF3BQ9BZI7 483 aaKnown RBP14.79□□□□□ -0.04
SHOX-203ENST00000381578 EIF2AK4Q9P2K8 1649 aaKnown RBP14.78□□□□□ -0.04
SHOX-203ENST00000381578 REC8O95072 547 aa14.78□□□□□ -0.04
SHOX-203ENST00000381578 BMP2KLQ5H9B9 411 aa14.78□□□□□ -0.04
SHOX-203ENST00000381578 IFT57Q9NWB7 429 aa14.78□□□□□ -0.04
SHOX-203ENST00000381578 HDAC1Q13547 482 aaPredicted RBP14.78□□□□□ -0.04
SHOX-203ENST00000381578 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
SHOX-203ENST00000381578 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.04
SHOX-203ENST00000381578 COL17A1Q9UMD9 1497 aaPredicted RBP14.77□□□□□ -0.04
SHOX-203ENST00000381578 PRDM15P57071 1507 aaPredicted RBP14.77□□□□□ -0.04
SHOX-203ENST00000381578 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.05
SHOX-203ENST00000381578 MBD3O95983 291 aa14.77□□□□□ -0.05
SHOX-203ENST00000381578 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
SHOX-203ENST00000381578 HMGN5P82970 282 aaKnown RBP14.77□□□□□ -0.05
SHOX-203ENST00000381578 TRERF1Q96PN7 1200 aa14.77□□□□□ -0.05
SHOX-203ENST00000381578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHOX-203ENST00000381578 GCC1Q96CN9 775 aa14.76□□□□□ -0.05
SHOX-203ENST00000381578 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
SHOX-203ENST00000381578 TSHZ3Q63HK5 1081 aa14.76□□□□□ -0.05
SHOX-203ENST00000381578 DIAPH1O60610 1272 aaKnown RBP14.76□□□□□ -0.05
SHOX-203ENST00000381578 KCNJ4P48050 445 aa14.76□□□□□ -0.05
SHOX-203ENST00000381578 CLTCL1P53675 1640 aa14.76□□□□□ -0.05
SHOX-203ENST00000381578 EFCAB6Q5THR3 1501 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 FBLN1P23142 703 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 PRKAR2BP31323 418 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 CCDC94Q9BW85 323 aaPredicted RBP14.75□□□□□ -0.05
SHOX-203ENST00000381578 TMEM63CQ9P1W3 806 aa14.75□□□□□ -0.05
SHOX-203ENST00000381578 ERICH4A6NGS2 130 aa14.74□□□□□ -0.05
SHOX-203ENST00000381578 HCLS1P14317 486 aaPredicted RBP14.74□□□□□ -0.05
SHOX-203ENST00000381578 SMAP1Q8IYB5 467 aaPredicted RBP14.74□□□□□ -0.05
SHOX-203ENST00000381578 LMBRD1Q9NUN5 540 aa14.74□□□□□ -0.05
SHOX-203ENST00000381578 C14orf93Q9H972 538 aaKnown RBP14.74□□□□□ -0.05
SHOX-203ENST00000381578 ZBTB40Q9NUA8 1239 aa14.74□□□□□ -0.05
SHOX-203ENST00000381578 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
SHOX-203ENST00000381578 VPS37CA5D8V6 355 aaPredicted RBP14.73□□□□□ -0.05
SHOX-203ENST00000381578 NECTIN2Q92692 538 aa14.73□□□□□ -0.05
SHOX-203ENST00000381578 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SHOX-203ENST00000381578 CWC22Q9HCG8 908 aaKnown RBP14.73□□□□□ -0.05
SHOX-203ENST00000381578 VGLL3A8MV65 326 aa14.73□□□□□ -0.05
SHOX-203ENST00000381578 ADCY5O95622 1261 aa14.73□□□□□ -0.05
SHOX-203ENST00000381578 NOLC1Q14978 699 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHOX-203ENST00000381578 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
SHOX-203ENST00000381578 DIAPH3Q9NSV4 1193 aa14.73□□□□□ -0.05
SHOX-203ENST00000381578 GOLGA6L6A8MZA4 724 aa14.72□□□□□ -0.05
SHOX-203ENST00000381578 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
SHOX-203ENST00000381578 FBXW7Q969H0 707 aa14.72□□□□□ -0.05
SHOX-203ENST00000381578 CEP152O94986 1710 aa14.72□□□□□ -0.05
SHOX-203ENST00000381578 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
SHOX-203ENST00000381578 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
SHOX-203ENST00000381578 OTUD7AQ8TE49 926 aaPredicted RBP14.71□□□□□ -0.05
SHOX-203ENST00000381578 ABCC3O15438 1527 aa14.71□□□□□ -0.05
SHOX-203ENST00000381578 GPT2Q8TD30 523 aa14.71□□□□□ -0.06
SHOX-203ENST00000381578 NSFL1CQ9UNZ2 370 aaKnown RBP14.71□□□□□ -0.06
SHOX-203ENST00000381578 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHOX-203ENST00000381578 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 ASXL1Q8IXJ9 1541 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 U2AF2P26368 475 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHOX-203ENST00000381578 ZNF445P59923 1031 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 TWISTNBQ3B726 338 aaPredicted RBP14.7□□□□□ -0.06
SHOX-203ENST00000381578 ATAD2Q6PL18 1390 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
SHOX-203ENST00000381578 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
SHOX-203ENST00000381578 PPRC1Q5VV67 1664 aaKnown RBP14.69□□□□□ -0.06
SHOX-203ENST00000381578 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
SHOX-203ENST00000381578 MAP4K4O95819 1239 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms