RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 A0A0G2JS52 829 aa16.24■□□□□ 0.19
APOBEC3F-202ENST00000381565 BAG6P46379 1132 aa16.24■□□□□ 0.19
APOBEC3F-202ENST00000381565 MYT1Q01538 1121 aa16.24■□□□□ 0.19
APOBEC3F-202ENST00000381565 SLC12A5Q9H2X9 1139 aa16.24■□□□□ 0.19
APOBEC3F-202ENST00000381565 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
APOBEC3F-202ENST00000381565 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
APOBEC3F-202ENST00000381565 EN1Q05925 392 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3F-202ENST00000381565 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3F-202ENST00000381565 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
APOBEC3F-202ENST00000381565 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
APOBEC3F-202ENST00000381565 TMF1P82094 1093 aa16.21■□□□□ 0.19
APOBEC3F-202ENST00000381565 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
APOBEC3F-202ENST00000381565 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 NLRP6P59044 892 aa16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 CHRNA2Q15822 529 aa16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 USP31Q70CQ4 1352 aa16.2■□□□□ 0.18
APOBEC3F-202ENST00000381565 ABCC6O95255 1503 aa16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 ANKRD36BQ8N2N9 1353 aa16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 GCP02774 474 aa16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
APOBEC3F-202ENST00000381565 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
APOBEC3F-202ENST00000381565 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3F-202ENST00000381565 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
APOBEC3F-202ENST00000381565 EZH2Q15910 746 aaKnown RBP16.17■□□□□ 0.18
APOBEC3F-202ENST00000381565 NME9Q86XW9 330 aa16.17■□□□□ 0.18
APOBEC3F-202ENST00000381565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
APOBEC3F-202ENST00000381565 TERF2IPQ9NYB0 399 aa16.17■□□□□ 0.18
APOBEC3F-202ENST00000381565 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
APOBEC3F-202ENST00000381565 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
APOBEC3F-202ENST00000381565 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
APOBEC3F-202ENST00000381565 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
APOBEC3F-202ENST00000381565 RREB1Q92766 1687 aa16.14■□□□□ 0.18
APOBEC3F-202ENST00000381565 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.17
APOBEC3F-202ENST00000381565 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
APOBEC3F-202ENST00000381565 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3F-202ENST00000381565 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
APOBEC3F-202ENST00000381565 TRIM37O94972 964 aa16.13■□□□□ 0.17
APOBEC3F-202ENST00000381565 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
APOBEC3F-202ENST00000381565 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
APOBEC3F-202ENST00000381565 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
APOBEC3F-202ENST00000381565 CDCA8Q53HL2 280 aa16.12■□□□□ 0.17
APOBEC3F-202ENST00000381565 STRN4Q9NRL3 753 aa16.12■□□□□ 0.17
APOBEC3F-202ENST00000381565 FAM196AQ6ZSG2 479 aa16.11■□□□□ 0.17
APOBEC3F-202ENST00000381565 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
APOBEC3F-202ENST00000381565 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
APOBEC3F-202ENST00000381565 SOX12O15370 315 aa16.1■□□□□ 0.17
APOBEC3F-202ENST00000381565 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
APOBEC3F-202ENST00000381565 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
APOBEC3F-202ENST00000381565 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
APOBEC3F-202ENST00000381565 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
APOBEC3F-202ENST00000381565 ZBTB7CA1YPR0 619 aa16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 CRB1P82279 1406 aa16.09■□□□□ 0.17
APOBEC3F-202ENST00000381565 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
APOBEC3F-202ENST00000381565 USP35Q9P2H5 1018 aa16.08■□□□□ 0.16
APOBEC3F-202ENST00000381565 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3F-202ENST00000381565 APBA3O96018 575 aa16.07■□□□□ 0.16
APOBEC3F-202ENST00000381565 SBF2Q86WG5 1849 aa16.07■□□□□ 0.16
APOBEC3F-202ENST00000381565 FYB1O15117 783 aa16.05■□□□□ 0.16
APOBEC3F-202ENST00000381565 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
APOBEC3F-202ENST00000381565 EVA1CP58658 441 aa16.04■□□□□ 0.16
APOBEC3F-202ENST00000381565 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3F-202ENST00000381565 TCP11L2Q8N4U5 519 aa16.03■□□□□ 0.16
APOBEC3F-202ENST00000381565 COG3Q96JB2 828 aa16.03■□□□□ 0.16
APOBEC3F-202ENST00000381565 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
APOBEC3F-202ENST00000381565 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
APOBEC3F-202ENST00000381565 PDE3BQ13370 1112 aa16.02■□□□□ 0.16
APOBEC3F-202ENST00000381565 ERBB3P21860 1342 aa16.01■□□□□ 0.15
APOBEC3F-202ENST00000381565 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
APOBEC3F-202ENST00000381565 FBLN1P23142 703 aa16.01■□□□□ 0.15
APOBEC3F-202ENST00000381565 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
APOBEC3F-202ENST00000381565 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
APOBEC3F-202ENST00000381565 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
APOBEC3F-202ENST00000381565 RTL1A6NKG5 1358 aa16■□□□□ 0.15
APOBEC3F-202ENST00000381565 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
APOBEC3F-202ENST00000381565 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
APOBEC3F-202ENST00000381565 TOM1L2Q6ZVM7 507 aa15.98■□□□□ 0.15
APOBEC3F-202ENST00000381565 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
APOBEC3F-202ENST00000381565 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
APOBEC3F-202ENST00000381565 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 CASZ1Q86V15 1759 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 HOXC9P31274 260 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 RRS1Q15050 365 aaKnown RBP15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 PTF1AQ7RTS3 328 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 IP6K1Q92551 441 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
APOBEC3F-202ENST00000381565 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
APOBEC3F-202ENST00000381565 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
APOBEC3F-202ENST00000381565 PANK3Q9H999 370 aa15.95■□□□□ 0.14
APOBEC3F-202ENST00000381565 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
APOBEC3F-202ENST00000381565 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
APOBEC3F-202ENST00000381565 NHSQ6T4R5 1651 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms