RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 AMOTL1Q8IY63 956 aa5.84□□□□□ -1.48
PTPRD-203ENST00000381196 MICALCLQ6ZW33 695 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC191Q8NCU4 936 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC94Q9BW85 323 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 RAD54L2Q9Y4B4 1467 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 HMGB3O15347 200 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 MBD5Q9P267 1494 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 CDK13Q14004 1512 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 HIP1O00291 1037 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 MFAP1P55081 439 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 UTP14AQ9BVJ6 771 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 RUFY2Q8WXA3 655 aa5.83□□□□□ -1.48
PTPRD-203ENST00000381196 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 AKAP17AQ02040 695 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 RBM33Q96EV2 1170 aaKnown RBP5.83□□□□□ -1.48
PTPRD-203ENST00000381196 NUTM2BA6NNL0 878 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 NUTM2EB1AL46 878 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 MARCH6O60337 910 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 NUTM2AQ8IVF1 878 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC50Q8IVM0 306 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 TTLL5Q6EMB2 1281 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 NLRP2Q9NX02 1062 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 TEFQ10587 303 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 TIGD1Q96MW7 591 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 CEP120Q8N960 986 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 BLMP54132 1417 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 NEURL4Q96JN8 1562 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 CNPY4Q8N129 248 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 GRIN2AQ12879 1464 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 ANKRD18BA2A2Z9 1011 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 APBB1O00213 710 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 LMNB2Q03252 620 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 SIN3AQ96ST3 1273 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC171Q6TFL3 1326 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 GCC1Q96CN9 775 aa5.82□□□□□ -1.48
PTPRD-203ENST00000381196 SCAF11Q99590 1463 aaKnown RBP5.82□□□□□ -1.48
PTPRD-203ENST00000381196 ARHGAP31Q2M1Z3 1444 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 TRPM1Q7Z4N2 1603 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 INTS3Q68E01 1043 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 KIAA1328Q86T90 577 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 RNF17Q9BXT8 1623 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 CBFA2T2O43439 604 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 GSDMDP57764 484 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 RASSF8Q8NHQ8 419 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 GOLGA6L19H0YKK7 550 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 B4GALNT3Q6L9W6 998 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 GRPEL1Q9HAV7 217 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 URB2Q14146 1524 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 PRDM15P57071 1507 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 GOLGA6L10A6NI86 522 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 VPS37DQ86XT2 251 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 RAPGEF4Q8WZA2 1011 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 SENP3-EIF4A1A0A087X0R7 540 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 BMS1Q14692 1282 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 CCAR1Q8IX12 1150 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 LUC7LQ9NQ29 371 aaKnown RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 RAD21O60216 631 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 LIG1P18858 919 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 ZKSCAN2Q63HK3 967 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 FBXO3Q9UK99 471 aa5.81□□□□□ -1.48
PTPRD-203ENST00000381196 AMER1Q5JTC6 1135 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-203ENST00000381196 TET3O43151 1660 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 WDR7Q9Y4E6 1490 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 IPO7O95373 1038 aaKnown RBP5.8□□□□□ -1.48
PTPRD-203ENST00000381196 FILIP1Q7Z7B0 1213 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 TSPY26PQ9H489 355 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 ELP1O95163 1332 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 ARHGAP5Q13017 1502 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 SPHKAPQ2M3C7 1700 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 CTAGE5O15320 804 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 SRCIN1Q9C0H9 1055 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 PIK3C2GO75747 1445 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 NEXNQ0ZGT2 675 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC112Q8NEF3 446 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 TRDNQ13061 729 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 ANKRD1Q15327 319 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 SPC24Q8NBT2 197 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 TTC37Q6PGP7 1564 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 PPFIA3O75145 1194 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 CDC45O75419 566 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
PTPRD-203ENST00000381196 ARAP3Q8WWN8 1544 aa5.8□□□□□ -1.48
PTPRD-203ENST00000381196 TSR1Q2NL82 804 aaKnown RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC91Q7Z6B0 441 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 ASXL2Q76L83 1435 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 DDX12PQ92771 950 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 LRPPRCP42704 1394 aaKnown RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 EVC2Q86UK5 1308 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC192P0DO97 292 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 EHBP1Q8NDI1 1231 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 BRMS1Q9HCU9 246 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 TRAK1Q9UPV9 953 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 RNF123Q5XPI4 1314 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 WDR33Q9C0J8 1336 aaKnown RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 THEMISQ8N1K5 641 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 SNX21Q969T3 373 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms