RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 RGS20O76081 388 aa10.16□□□□□ -0.78
TTC39B-203ENST00000380853 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
TTC39B-203ENST00000380853 NBPF3Q9H094 633 aa10.16□□□□□ -0.78
TTC39B-203ENST00000380853 AMOTL2Q9Y2J4 779 aa10.16□□□□□ -0.78
TTC39B-203ENST00000380853 NEXMIFQ5QGS0 1516 aa10.16□□□□□ -0.78
TTC39B-203ENST00000380853 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
TTC39B-203ENST00000380853 HFM1A2PYH4 1435 aa10.15□□□□□ -0.78
TTC39B-203ENST00000380853 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.79
TTC39B-203ENST00000380853 DCCP43146 1447 aa10.14□□□□□ -0.79
TTC39B-203ENST00000380853 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
TTC39B-203ENST00000380853 PTPRUQ92729 1446 aa10.14□□□□□ -0.79
TTC39B-203ENST00000380853 C19orf44Q9H6X5 657 aa10.14□□□□□ -0.79
TTC39B-203ENST00000380853 PROX2Q3B8N5 592 aa10.13□□□□□ -0.79
TTC39B-203ENST00000380853 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
TTC39B-203ENST00000380853 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
TTC39B-203ENST00000380853 SHPRHQ149N8 1683 aa10.12□□□□□ -0.79
TTC39B-203ENST00000380853 NALCNQ8IZF0 1738 aa10.12□□□□□ -0.79
TTC39B-203ENST00000380853 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
TTC39B-203ENST00000380853 ADGRL3Q9HAR2 1447 aa10.12□□□□□ -0.79
TTC39B-203ENST00000380853 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
TTC39B-203ENST00000380853 EMILIN3Q9NT22 766 aa10.11□□□□□ -0.79
TTC39B-203ENST00000380853 PCDHGA10Q9Y5H3 936 aa10.11□□□□□ -0.79
TTC39B-203ENST00000380853 METP08581 1390 aa10.11□□□□□ -0.79
TTC39B-203ENST00000380853 SETD1AO15047 1707 aaKnown RBP10.11□□□□□ -0.79
TTC39B-203ENST00000380853 PPLO60437 1756 aa10.11□□□□□ -0.79
TTC39B-203ENST00000380853 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
TTC39B-203ENST00000380853 COL9A1P20849 921 aa10.1□□□□□ -0.79
TTC39B-203ENST00000380853 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
TTC39B-203ENST00000380853 NHSL1Q5SYE7 1610 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 BCAMP50895 628 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 BRINP3Q76B58 766 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 RGS17Q9UGC6 210 aaPredicted RBP10.09□□□□□ -0.79
TTC39B-203ENST00000380853 CCDC144AA2RUR9 1427 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 MST1RQ04912 1400 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 PTCH1Q13635 1447 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 LRP6O75581 1613 aa10.09□□□□□ -0.79
TTC39B-203ENST00000380853 MFSD10Q14728 455 aa10.08□□□□□ -0.8
TTC39B-203ENST00000380853 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
TTC39B-203ENST00000380853 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
TTC39B-203ENST00000380853 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
TTC39B-203ENST00000380853 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
TTC39B-203ENST00000380853 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
TTC39B-203ENST00000380853 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
TTC39B-203ENST00000380853 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
TTC39B-203ENST00000380853 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
TTC39B-203ENST00000380853 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
TTC39B-203ENST00000380853 SETD5Q9C0A6 1442 aa10.05□□□□□ -0.8
TTC39B-203ENST00000380853 ROBO2Q9HCK4 1378 aa10.04□□□□□ -0.8
TTC39B-203ENST00000380853 IFT172Q9UG01 1749 aa10.04□□□□□ -0.8
TTC39B-203ENST00000380853 CDC42BPGQ6DT37 1551 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 C1orf167Q5SNV9 1468 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 TYW1BQ6NUM6 668 aa10.03□□□□□ -0.8
TTC39B-203ENST00000380853 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
TTC39B-203ENST00000380853 KNDC1Q76NI1 1749 aa10.02□□□□□ -0.81
TTC39B-203ENST00000380853 ACIN1Q9UKV3 1341 aaKnown RBP10.02□□□□□ -0.81
TTC39B-203ENST00000380853 MPHOSPH9Q99550 1183 aa10.02□□□□□ -0.81
TTC39B-203ENST00000380853 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
TTC39B-203ENST00000380853 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 AFF2P51816 1311 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 PHF14O94880 888 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 DDX17Q92841 729 aaKnown RBP10.01□□□□□ -0.81
TTC39B-203ENST00000380853 FBXW7Q969H0 707 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
TTC39B-203ENST00000380853 C8orf37Q96NL8 207 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 STK26Q9P289 416 aa10.01□□□□□ -0.81
TTC39B-203ENST00000380853 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
TTC39B-203ENST00000380853 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 LAMC1P11047 1609 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 ADGRF5Q8IZF2 1346 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 RXRBP28702 533 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 WBP1LQ9NX94 342 aa10□□□□□ -0.81
TTC39B-203ENST00000380853 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
TTC39B-203ENST00000380853 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
TTC39B-203ENST00000380853 NPHP3Q7Z494 1330 aa9.98□□□□□ -0.81
TTC39B-203ENST00000380853 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
TTC39B-203ENST00000380853 KIF1AQ12756 1690 aa9.98□□□□□ -0.81
TTC39B-203ENST00000380853 CDK12Q9NYV4 1490 aaPredicted RBP9.97□□□□□ -0.81
TTC39B-203ENST00000380853 TECPR2O15040 1411 aa9.97□□□□□ -0.81
TTC39B-203ENST00000380853 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
TTC39B-203ENST00000380853 ORAI2Q96SN7 254 aa9.97□□□□□ -0.81
TTC39B-203ENST00000380853 MYOM2P54296 1465 aa9.96□□□□□ -0.81
TTC39B-203ENST00000380853 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.81
TTC39B-203ENST00000380853 YTHDC2Q9H6S0 1430 aaKnown RBP9.96□□□□□ -0.81
TTC39B-203ENST00000380853 NUTM2FA1L443 756 aa9.96□□□□□ -0.82
TTC39B-203ENST00000380853 C6orf132Q5T0Z8 1188 aa9.96□□□□□ -0.82
TTC39B-203ENST00000380853 Q6ZNB5 142 aa9.96□□□□□ -0.82
TTC39B-203ENST00000380853 NGLY1Q96IV0 654 aa9.96□□□□□ -0.82
TTC39B-203ENST00000380853 COL22A1Q8NFW1 1626 aaPredicted RBP9.96□□□□□ -0.82
TTC39B-203ENST00000380853 RAB3GAP2Q9H2M9 1393 aa9.96□□□□□ -0.82
TTC39B-203ENST00000380853 SOS2Q07890 1332 aaPredicted RBP9.95□□□□□ -0.82
TTC39B-203ENST00000380853 TMEM132EQ6IEE7 984 aa9.95□□□□□ -0.82
TTC39B-203ENST00000380853 RGS12O14924 1447 aa9.94□□□□□ -0.82
TTC39B-203ENST00000380853 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
TTC39B-203ENST00000380853 KCNC4Q03721 635 aa9.94□□□□□ -0.82
TTC39B-203ENST00000380853 NYAP1Q6ZVC0 841 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms