RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 MYL6BP14649 208 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 KIF6Q6ZMV9 814 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 GBP6Q6ZN66 633 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 SEPT14Q6ZU15 432 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
CLCN4-202ENST00000380833 RABEP1Q15276 862 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 POLR3GO15318 223 aaPredicted RBP12.73□□□□□ -0.37
CLCN4-202ENST00000380833 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 NAT10Q9H0A0 1025 aaKnown RBP12.73□□□□□ -0.37
CLCN4-202ENST00000380833 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLCN4-202ENST00000380833 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 FHAD1B1AJZ9 1412 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CLCN4-202ENST00000380833 TTLL12Q14166 644 aaPredicted RBP12.72□□□□□ -0.37
CLCN4-202ENST00000380833 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
CLCN4-202ENST00000380833 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
CLCN4-202ENST00000380833 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
CLCN4-202ENST00000380833 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
CLCN4-202ENST00000380833 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
CLCN4-202ENST00000380833 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
CLCN4-202ENST00000380833 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
CLCN4-202ENST00000380833 UBXN4Q92575 508 aa12.72□□□□□ -0.37
CLCN4-202ENST00000380833 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.37
CLCN4-202ENST00000380833 STK3Q13188 491 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 CA8P35219 290 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
CLCN4-202ENST00000380833 A0A1B0GUA9 196 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 MCM5P33992 734 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 FSD1Q9BTV5 496 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.38
CLCN4-202ENST00000380833 BMS1Q14692 1282 aaKnown RBP12.71□□□□□ -0.38
CLCN4-202ENST00000380833 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.38
CLCN4-202ENST00000380833 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.38
CLCN4-202ENST00000380833 GOLGA6L9A6NEM1 432 aa12.7□□□□□ -0.38
CLCN4-202ENST00000380833 KIF2AO00139 706 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-202ENST00000380833 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
CLCN4-202ENST00000380833 SEPT11Q9NVA2 429 aaKnown RBP12.7□□□□□ -0.38
CLCN4-202ENST00000380833 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
CLCN4-202ENST00000380833 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
CLCN4-202ENST00000380833 LMAN1P49257 510 aa12.69□□□□□ -0.38
CLCN4-202ENST00000380833 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
CLCN4-202ENST00000380833 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
CLCN4-202ENST00000380833 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
CLCN4-202ENST00000380833 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
CLCN4-202ENST00000380833 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
CLCN4-202ENST00000380833 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLCN4-202ENST00000380833 MPNDQ8N594 471 aa12.68□□□□□ -0.38
CLCN4-202ENST00000380833 ZNHIT6Q9NWK9 470 aaKnown RBP12.68□□□□□ -0.38
CLCN4-202ENST00000380833 USP5P45974 858 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 SYCP1Q15431 976 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 FHOD3Q2V2M9 1422 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 RSRC1Q96IZ7 334 aaKnown RBP12.67□□□□□ -0.38
CLCN4-202ENST00000380833 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 ERLIN2O94905 339 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 MICALL1Q8N3F8 863 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
CLCN4-202ENST00000380833 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
CLCN4-202ENST00000380833 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 SCLT1Q96NL6 688 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 NEBLO76041 1014 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 SLC4A8Q2Y0W8 1093 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 DAAM2Q86T65 1068 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 TANGO6Q9C0B7 1094 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
CLCN4-202ENST00000380833 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
CLCN4-202ENST00000380833 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 MAP2K2P36507 400 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 TMEM87AQ8NBN3 555 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 SMC2O95347 1197 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 NAA25Q14CX7 972 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
CLCN4-202ENST00000380833 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.39
CLCN4-202ENST00000380833 CABP4P57796 275 aa12.64□□□□□ -0.39
CLCN4-202ENST00000380833 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
CLCN4-202ENST00000380833 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
CLCN4-202ENST00000380833 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
CLCN4-202ENST00000380833 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
CLCN4-202ENST00000380833 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
CLCN4-202ENST00000380833 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLCN4-202ENST00000380833 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 MCM4P33991 863 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 SURF6O75683 361 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms