RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
CCDC171-201ENST00000380701 ZPR1O75312 459 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 TMOD3Q9NYL9 352 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 VPS37CA5D8V6 355 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 TRAF1Q13077 416 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 SYCP1Q15431 976 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 SETQ01105 290 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 PHF8Q9UPP1 1060 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 NESP48681 1621 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 RAPGEF3O95398 923 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 TNIP1Q15025 636 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 MAGEC2Q9UBF1 373 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 GRIN2AQ12879 1464 aa8.54□□□□□ -1.04
CCDC171-201ENST00000380701 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
CCDC171-201ENST00000380701 KIF14Q15058 1648 aa8.53□□□□□ -1.04
CCDC171-201ENST00000380701 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC171-201ENST00000380701 GNAT3A8MTJ3 354 aa8.53□□□□□ -1.04
CCDC171-201ENST00000380701 IFIT1P09914 478 aaKnown RBP8.53□□□□□ -1.04
CCDC171-201ENST00000380701 ZSCAN31Q96LW9 406 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-201ENST00000380701 PLIN1O60240 522 aa8.53□□□□□ -1.04
CCDC171-201ENST00000380701 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
CCDC171-201ENST00000380701 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-201ENST00000380701 LRRCC1Q9C099 1032 aa8.53□□□□□ -1.04
CCDC171-201ENST00000380701 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
CCDC171-201ENST00000380701 ERCC4Q92889 916 aaPredicted RBP8.52□□□□□ -1.04
CCDC171-201ENST00000380701 MAP3K1Q13233 1512 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 FYB1O15117 783 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 CAVIN4Q5BKX8 364 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 AK7Q96M32 723 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 SLC26A8Q96RN1 970 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 ARGLU1Q9NWB6 273 aaPredicted RBP8.52□□□□□ -1.05
CCDC171-201ENST00000380701 BTBD11A6QL63 1104 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 NFE2L2Q16236 605 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 KINO60870 393 aaKnown RBP8.52□□□□□ -1.05
CCDC171-201ENST00000380701 LDHCP07864 332 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 SDF4Q9BRK5 362 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 RAB11FIP3O75154 756 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
CCDC171-201ENST00000380701 MSH6P52701 1360 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 CCDC69A6NI79 296 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 SLC4A2P04920 1241 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 CYP46A1Q9Y6A2 500 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 MPHOSPH10O00566 681 aaKnown RBP8.51□□□□□ -1.05
CCDC171-201ENST00000380701 DNAJC2Q99543 621 aaKnown RBP8.51□□□□□ -1.05
CCDC171-201ENST00000380701 NCOA1Q15788 1441 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 ARAP1Q96P48 1450 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 EXOC5O00471 708 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-201ENST00000380701 MPHOSPH6Q99547 160 aaKnown RBP8.51□□□□□ -1.05
CCDC171-201ENST00000380701 UBAC1Q9BSL1 405 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-201ENST00000380701 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 PIP4K2BP78356 416 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 TIAM1Q13009 1591 aa8.51□□□□□ -1.05
CCDC171-201ENST00000380701 RUFY1Q96T51 708 aa8.5□□□□□ -1.05
CCDC171-201ENST00000380701 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
CCDC171-201ENST00000380701 CCDC196A0A1B0GTZ2 297 aa8.5□□□□□ -1.05
CCDC171-201ENST00000380701 LNPKQ9C0E8 428 aa8.5□□□□□ -1.05
CCDC171-201ENST00000380701 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
CCDC171-201ENST00000380701 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
CCDC171-201ENST00000380701 RBM5P52756 815 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC171-201ENST00000380701 EXOSC9Q06265 439 aaKnown RBP8.5□□□□□ -1.05
CCDC171-201ENST00000380701 CEP131Q9UPN4 1083 aa8.5□□□□□ -1.05
CCDC171-201ENST00000380701 TNRQ92752 1358 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 SMC2O95347 1197 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 PHAXQ9H814 394 aaKnown RBP8.49□□□□□ -1.05
CCDC171-201ENST00000380701 FOXD4L1Q9NU39 408 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 ANKRD18AQ8IVF6 992 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 TTC21AQ8NDW8 1320 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 PDE4CQ08493 712 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 STK38Q15208 465 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 PPP4R3AQ6IN85 833 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
CCDC171-201ENST00000380701 HSP90AA2PQ14568 343 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-201ENST00000380701 SAMD1Q6SPF0 538 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-201ENST00000380701 PAF1Q8N7H5 531 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 RNF41Q9H4P4 317 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-201ENST00000380701 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 KIF20AO95235 890 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 TEX35Q5T0J7 233 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 SLC12A5Q9H2X9 1139 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 IFT57Q9NWB7 429 aa8.49□□□□□ -1.05
CCDC171-201ENST00000380701 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 NPHP3Q7Z494 1330 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 DCTN1Q14203 1278 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 ALDH1L2Q3SY69 923 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 FMNL2Q96PY5 1086 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms