RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 SLC34A2O95436 690 aa12.61□□□□□ -0.39
PMS2-202ENST00000380416 HSPA6P17066 643 aa12.61□□□□□ -0.39
PMS2-202ENST00000380416 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
PMS2-202ENST00000380416 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
PMS2-202ENST00000380416 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
PMS2-202ENST00000380416 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
PMS2-202ENST00000380416 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
PMS2-202ENST00000380416 TRAK1Q9UPV9 953 aa12.6□□□□□ -0.39
PMS2-202ENST00000380416 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
PMS2-202ENST00000380416 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
PMS2-202ENST00000380416 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
PMS2-202ENST00000380416 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
PMS2-202ENST00000380416 PLSCR1O15162 318 aa12.57□□□□□ -0.4
PMS2-202ENST00000380416 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
PMS2-202ENST00000380416 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
PMS2-202ENST00000380416 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
PMS2-202ENST00000380416 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
PMS2-202ENST00000380416 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
PMS2-202ENST00000380416 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
PMS2-202ENST00000380416 GPR162Q16538 588 aa12.55□□□□□ -0.4
PMS2-202ENST00000380416 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
PMS2-202ENST00000380416 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
PMS2-202ENST00000380416 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
PMS2-202ENST00000380416 HIRIP3Q9BW71 556 aaPredicted RBP12.54□□□□□ -0.4
PMS2-202ENST00000380416 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
PMS2-202ENST00000380416 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
PMS2-202ENST00000380416 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
PMS2-202ENST00000380416 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
PMS2-202ENST00000380416 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
PMS2-202ENST00000380416 ARXQ96QS3 562 aa12.53□□□□□ -0.4
PMS2-202ENST00000380416 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
PMS2-202ENST00000380416 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
PMS2-202ENST00000380416 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
PMS2-202ENST00000380416 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
PMS2-202ENST00000380416 PRELPP51888 382 aa12.52□□□□□ -0.41
PMS2-202ENST00000380416 L3MBTL2Q969R5 705 aa12.52□□□□□ -0.41
PMS2-202ENST00000380416 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
PMS2-202ENST00000380416 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
PMS2-202ENST00000380416 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
PMS2-202ENST00000380416 BCL11BQ9C0K0 894 aaPredicted RBP12.51□□□□□ -0.41
PMS2-202ENST00000380416 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
PMS2-202ENST00000380416 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 ATP7BP35670 1465 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 LRRC37A3O60309 1634 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 COL24A1Q17RW2 1714 aa12.5□□□□□ -0.41
PMS2-202ENST00000380416 SLC15A2Q16348 729 aa12.49□□□□□ -0.41
PMS2-202ENST00000380416 PMFBP1Q8TBY8 1022 aa12.49□□□□□ -0.41
PMS2-202ENST00000380416 STK32BQ9NY57 414 aa12.49□□□□□ -0.41
PMS2-202ENST00000380416 LMO7Q8WWI1 1683 aa12.48□□□□□ -0.41
PMS2-202ENST00000380416 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
PMS2-202ENST00000380416 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
PMS2-202ENST00000380416 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
PMS2-202ENST00000380416 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
PMS2-202ENST00000380416 ADCY9O60503 1353 aa12.47□□□□□ -0.41
PMS2-202ENST00000380416 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
PMS2-202ENST00000380416 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
PMS2-202ENST00000380416 CENPJQ9HC77 1338 aaPredicted RBP12.47□□□□□ -0.41
PMS2-202ENST00000380416 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
PMS2-202ENST00000380416 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
PMS2-202ENST00000380416 AATKQ6ZMQ8 1374 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 CHRNA2Q15822 529 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
PMS2-202ENST00000380416 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
PMS2-202ENST00000380416 NGDNQ8NEJ9 315 aaKnown RBP12.45□□□□□ -0.42
PMS2-202ENST00000380416 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
PMS2-202ENST00000380416 PCDH10Q9P2E7 1040 aa12.45□□□□□ -0.42
PMS2-202ENST00000380416 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
PMS2-202ENST00000380416 BCL9O00512 1426 aa12.45□□□□□ -0.42
PMS2-202ENST00000380416 APLP1P51693 650 aa12.44□□□□□ -0.42
PMS2-202ENST00000380416 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
PMS2-202ENST00000380416 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
PMS2-202ENST00000380416 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
PMS2-202ENST00000380416 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
PMS2-202ENST00000380416 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
PMS2-202ENST00000380416 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
PMS2-202ENST00000380416 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
PMS2-202ENST00000380416 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
PMS2-202ENST00000380416 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
PMS2-202ENST00000380416 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
PMS2-202ENST00000380416 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
PMS2-202ENST00000380416 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
PMS2-202ENST00000380416 GABBR2O75899 941 aa12.42□□□□□ -0.42
PMS2-202ENST00000380416 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
PMS2-202ENST00000380416 LHX8Q68G74 356 aa12.42□□□□□ -0.42
PMS2-202ENST00000380416 MIER1Q8N108 512 aa12.42□□□□□ -0.42
PMS2-202ENST00000380416 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
PMS2-202ENST00000380416 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
PMS2-202ENST00000380416 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
PMS2-202ENST00000380416 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
PMS2-202ENST00000380416 PPIP5K1Q6PFW1 1433 aa12.4□□□□□ -0.42
PMS2-202ENST00000380416 EVA1CP58658 441 aa12.4□□□□□ -0.42
PMS2-202ENST00000380416 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms