RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ZMYM3Q14202 1370 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 CLGNO14967 610 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.05□□□□□ -0.32
USP6NL-202ENST00000379237 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
USP6NL-202ENST00000379237 ERC2O15083 957 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 LMAN1P49257 510 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
USP6NL-202ENST00000379237 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
USP6NL-202ENST00000379237 INSRP06213 1382 aa13.05□□□□□ -0.32
USP6NL-202ENST00000379237 MTHFSP49914 203 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
USP6NL-202ENST00000379237 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 NAA30Q147X3 362 aaPredicted RBP13.04□□□□□ -0.32
USP6NL-202ENST00000379237 ELF2Q15723 593 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
USP6NL-202ENST00000379237 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 DRC1Q96MC2 740 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 ROCK1Q13464 1354 aa13.04□□□□□ -0.32
USP6NL-202ENST00000379237 MX1P20591 662 aa13.03□□□□□ -0.32
USP6NL-202ENST00000379237 NEK11Q8NG66 645 aa13.03□□□□□ -0.32
USP6NL-202ENST00000379237 GADD45BO75293 160 aaPredicted RBP13.03□□□□□ -0.32
USP6NL-202ENST00000379237 TRMT2AQ8IZ69 625 aaKnown RBP13.03□□□□□ -0.32
USP6NL-202ENST00000379237 CTNNA3Q9UI47 895 aa13.03□□□□□ -0.32
USP6NL-202ENST00000379237 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
USP6NL-202ENST00000379237 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
USP6NL-202ENST00000379237 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
USP6NL-202ENST00000379237 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.33
USP6NL-202ENST00000379237 SLFN14P0C7P3 912 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.334e-6■■□□□ 11.6
USP6NL-202ENST00000379237 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 SLU7O95391 586 aaKnown RBP13.01□□□□□ -0.33
USP6NL-202ENST00000379237 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 DDIT3P35638 169 aa13.01□□□□□ -0.33
USP6NL-202ENST00000379237 NLRP1Q9C000 1473 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 HMMRO75330 724 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 MYCBPQ99417 103 aaPredicted RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 TTC31Q49AM3 519 aaPredicted RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 EFCC1Q9HA90 598 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 UBE2HP62256 183 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 SMARCA5O60264 1052 aaPredicted RBP13□□□□□ -0.33
USP6NL-202ENST00000379237 LRMPQ12912 555 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 ANKRD7Q92527 254 aa13□□□□□ -0.33
USP6NL-202ENST00000379237 ABCC5O15440 1437 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 TTLL5Q6EMB2 1281 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 TESK2Q96S53 571 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 RAD51AP2Q09MP3 1159 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
USP6NL-202ENST00000379237 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
USP6NL-202ENST00000379237 FAM177A1Q8N128 213 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-202ENST00000379237 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 CLEC17AQ6ZS10 378 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 USP26Q9BXU7 913 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 SPTLC3Q9NUV7 552 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
USP6NL-202ENST00000379237 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
USP6NL-202ENST00000379237 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-202ENST00000379237 LUZP1Q86V48 1076 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-202ENST00000379237 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 SKILP12757 684 aa12.97□□□□□ -0.33
USP6NL-202ENST00000379237 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 KDM6BO15054 1643 aa12.96□□□□□ -0.33
USP6NL-202ENST00000379237 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
USP6NL-202ENST00000379237 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.33
USP6NL-202ENST00000379237 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 URI1O94763 535 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-202ENST00000379237 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.34
USP6NL-202ENST00000379237 KDM5CP41229 1560 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 H0YHG0 523 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 MNAT1P51948 309 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 SNW1Q13573 536 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms