RNA–Protein interactions for RNA: ENST00000378615.7

C11orf49-202, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene C11orf49, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-202ENST00000378615 SEC24BO95487 1268 aa13.06□□□□□ -0.32
C11orf49-202ENST00000378615 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
C11orf49-202ENST00000378615 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
C11orf49-202ENST00000378615 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
C11orf49-202ENST00000378615 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 PIK3R4Q99570 1358 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
C11orf49-202ENST00000378615 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 TNNQ9UQP3 1299 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 LRRC7Q96NW7 1537 aa13.05□□□□□ -0.32
C11orf49-202ENST00000378615 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
C11orf49-202ENST00000378615 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
C11orf49-202ENST00000378615 TECPR2O15040 1411 aa13.04□□□□□ -0.32
C11orf49-202ENST00000378615 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
C11orf49-202ENST00000378615 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 ANTXR1Q9H6X2 564 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
C11orf49-202ENST00000378615 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
C11orf49-202ENST00000378615 GNAI1P63096 354 aa13.02□□□□□ -0.32
C11orf49-202ENST00000378615 L1TD1Q5T7N2 865 aaKnown RBP13.02□□□□□ -0.32
C11orf49-202ENST00000378615 GCC1Q96CN9 775 aa13.02□□□□□ -0.32
C11orf49-202ENST00000378615 IFT57Q9NWB7 429 aa13.02□□□□□ -0.32
C11orf49-202ENST00000378615 NUCB1Q02818 461 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 TMEM57Q8N5G2 664 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 TBC1D2Q9BYX2 928 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
C11orf49-202ENST00000378615 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
C11orf49-202ENST00000378615 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
C11orf49-202ENST00000378615 CPS1P31327 1500 aa13.01□□□□□ -0.33
C11orf49-202ENST00000378615 PRKAR2BP31323 418 aa13□□□□□ -0.33
C11orf49-202ENST00000378615 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
C11orf49-202ENST00000378615 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
C11orf49-202ENST00000378615 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
C11orf49-202ENST00000378615 KCNA6P17658 529 aa12.99□□□□□ -0.33
C11orf49-202ENST00000378615 CHMP5Q9NZZ3 219 aa12.99□□□□□ -0.33
C11orf49-202ENST00000378615 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
C11orf49-202ENST00000378615 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
C11orf49-202ENST00000378615 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
C11orf49-202ENST00000378615 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
C11orf49-202ENST00000378615 BMP2KLQ5H9B9 411 aa12.98□□□□□ -0.33
C11orf49-202ENST00000378615 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
C11orf49-202ENST00000378615 SNX21Q969T3 373 aa12.98□□□□□ -0.33
C11orf49-202ENST00000378615 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
C11orf49-202ENST00000378615 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
C11orf49-202ENST00000378615 PTMSP20962 102 aa12.97□□□□□ -0.33
C11orf49-202ENST00000378615 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
C11orf49-202ENST00000378615 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
C11orf49-202ENST00000378615 VAMP4O75379 141 aa12.96□□□□□ -0.33
C11orf49-202ENST00000378615 ZNF853P0CG23 659 aa12.96□□□□□ -0.33
C11orf49-202ENST00000378615 IL13P35225 146 aa12.96□□□□□ -0.33
C11orf49-202ENST00000378615 MFAP1P55081 439 aaKnown RBP12.96□□□□□ -0.33
C11orf49-202ENST00000378615 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
C11orf49-202ENST00000378615 AKAP12Q02952 1782 aa12.96□□□□□ -0.33
C11orf49-202ENST00000378615 ITSN1Q15811 1721 aa12.96□□□□□ -0.34
C11orf49-202ENST00000378615 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
C11orf49-202ENST00000378615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.34
C11orf49-202ENST00000378615 COG3Q96JB2 828 aa12.96□□□□□ -0.34
C11orf49-202ENST00000378615 ABCC4O15439 1325 aa12.95□□□□□ -0.34
C11orf49-202ENST00000378615 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
C11orf49-202ENST00000378615 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
C11orf49-202ENST00000378615 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
C11orf49-202ENST00000378615 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
C11orf49-202ENST00000378615 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
C11orf49-202ENST00000378615 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
C11orf49-202ENST00000378615 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
C11orf49-202ENST00000378615 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
C11orf49-202ENST00000378615 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
C11orf49-202ENST00000378615 MCM4P33991 863 aa12.93□□□□□ -0.34
C11orf49-202ENST00000378615 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
C11orf49-202ENST00000378615 TWISTNBQ3B726 338 aaPredicted RBP12.92□□□□□ -0.34
C11orf49-202ENST00000378615 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
C11orf49-202ENST00000378615 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
C11orf49-202ENST00000378615 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
C11orf49-202ENST00000378615 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
C11orf49-202ENST00000378615 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
C11orf49-202ENST00000378615 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
C11orf49-202ENST00000378615 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
C11orf49-202ENST00000378615 LNPKQ9C0E8 428 aa12.9□□□□□ -0.34
C11orf49-202ENST00000378615 HMOX1P09601 288 aa12.89□□□□□ -0.35
C11orf49-202ENST00000378615 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
C11orf49-202ENST00000378615 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
C11orf49-202ENST00000378615 GOLGA6L3A6NEY3 463 aa12.88□□□□□ -0.35
C11orf49-202ENST00000378615 SKOR2Q2VWA4 1001 aaPredicted RBP12.88□□□□□ -0.35
C11orf49-202ENST00000378615 NME9Q86XW9 330 aa12.88□□□□□ -0.35
C11orf49-202ENST00000378615 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
C11orf49-202ENST00000378615 GBP4Q96PP9 640 aa12.88□□□□□ -0.35
C11orf49-202ENST00000378615 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
C11orf49-202ENST00000378615 CDC45O75419 566 aa12.87□□□□□ -0.35
C11orf49-202ENST00000378615 DDIT3P35638 169 aa12.87□□□□□ -0.35
C11orf49-202ENST00000378615 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
C11orf49-202ENST00000378615 PTPRCP08575 1304 aa12.87□□□□□ -0.35
C11orf49-202ENST00000378615 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms