RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 PSDA5PKW4 1024 aaPredicted RBP23.85■■□□□ 1.41
RER1-202ENST00000378512 TRIM37O94972 964 aa23.85■■□□□ 1.41
RER1-202ENST00000378512 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
RER1-202ENST00000378512 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
RER1-202ENST00000378512 TERF2IPQ9NYB0 399 aa23.85■■□□□ 1.41
RER1-202ENST00000378512 SOX12O15370 315 aa23.84■■□□□ 1.41
RER1-202ENST00000378512 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
RER1-202ENST00000378512 AXIN2Q9Y2T1 843 aa23.84■■□□□ 1.41
RER1-202ENST00000378512 ANKRD36BQ8N2N9 1353 aa23.82■■□□□ 1.4
RER1-202ENST00000378512 EZH2Q15910 746 aaKnown RBP23.82■■□□□ 1.4
RER1-202ENST00000378512 FAM196AQ6ZSG2 479 aa23.82■■□□□ 1.4
RER1-202ENST00000378512 CRB1P82279 1406 aa23.82■■□□□ 1.4
RER1-202ENST00000378512 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
RER1-202ENST00000378512 CDCA8Q53HL2 280 aa23.81■■□□□ 1.4
RER1-202ENST00000378512 DISP2A7MBM2 1401 aa23.81■■□□□ 1.4
RER1-202ENST00000378512 ABCC6O95255 1503 aa23.8■■□□□ 1.4
RER1-202ENST00000378512 PARP4Q9UKK3 1724 aaKnown RBP23.8■■□□□ 1.4
RER1-202ENST00000378512 KCNH5Q8NCM2 988 aa23.8■■□□□ 1.4
RER1-202ENST00000378512 RGPD5Q99666 1765 aa23.79■■□□□ 1.4
RER1-202ENST00000378512 OVOS2A0A0J9YW53 1432 aa23.79■■□□□ 1.4
RER1-202ENST00000378512 OVOS2Q6IE36 1432 aa23.79■■□□□ 1.4
RER1-202ENST00000378512 ARHGEF25Q86VW2 580 aa23.79■■□□□ 1.4
RER1-202ENST00000378512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.4
RER1-202ENST00000378512 THRAP3Q9Y2W1 955 aaKnown RBP23.78■■□□□ 1.4
RER1-202ENST00000378512 LTN1O94822 1766 aa23.77■■□□□ 1.4
RER1-202ENST00000378512 NME9Q86XW9 330 aa23.77■■□□□ 1.4
RER1-202ENST00000378512 CAMKK2Q96RR4 588 aa23.77■■□□□ 1.4
RER1-202ENST00000378512 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
RER1-202ENST00000378512 APBA3O96018 575 aa23.76■■□□□ 1.39
RER1-202ENST00000378512 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
RER1-202ENST00000378512 TOM1L2Q6ZVM7 507 aa23.76■■□□□ 1.39
RER1-202ENST00000378512 R3HDM1Q15032 1099 aaKnown RBP23.75■■□□□ 1.39
RER1-202ENST00000378512 WDR17Q8IZU2 1322 aa23.74■■□□□ 1.39
RER1-202ENST00000378512 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
RER1-202ENST00000378512 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
RER1-202ENST00000378512 WNK3Q9BYP7 1800 aa23.73■■□□□ 1.39
RER1-202ENST00000378512 LRP5O75197 1615 aa23.72■■□□□ 1.39
RER1-202ENST00000378512 KIF20BQ96Q89 1820 aa23.72■■□□□ 1.39
RER1-202ENST00000378512 RREB1Q92766 1687 aa23.7■■□□□ 1.38
RER1-202ENST00000378512 PTF1AQ7RTS3 328 aa23.69■■□□□ 1.38
RER1-202ENST00000378512 NUP188Q5SRE5 1749 aa23.68■■□□□ 1.38
RER1-202ENST00000378512 CSB-PGBD3P0DP91 1061 aa23.67■■□□□ 1.38
RER1-202ENST00000378512 DDB1Q16531 1140 aa23.67■■□□□ 1.38
RER1-202ENST00000378512 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
RER1-202ENST00000378512 FYB1O15117 783 aa23.66■■□□□ 1.38
RER1-202ENST00000378512 MARCH10Q8NA82 808 aaPredicted RBP23.66■■□□□ 1.38
RER1-202ENST00000378512 CARD10Q9BWT7 1032 aa23.66■■□□□ 1.38
RER1-202ENST00000378512 CARD14Q9BXL6 1004 aa23.66■■□□□ 1.38
RER1-202ENST00000378512 SBF2Q86WG5 1849 aa23.65■■□□□ 1.38
RER1-202ENST00000378512 PARD3Q8TEW0 1356 aa23.64■■□□□ 1.37
RER1-202ENST00000378512 COG3Q96JB2 828 aa23.62■■□□□ 1.37
RER1-202ENST00000378512 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
RER1-202ENST00000378512 FAM208AQ9UK61 1670 aaKnown RBP23.61■■□□□ 1.37
RER1-202ENST00000378512 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
RER1-202ENST00000378512 ERBB3P21860 1342 aa23.59■■□□□ 1.37
RER1-202ENST00000378512 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
RER1-202ENST00000378512 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
RER1-202ENST00000378512 FBLN1P23142 703 aa23.57■■□□□ 1.36
RER1-202ENST00000378512 IP6K1Q92551 441 aa23.57■■□□□ 1.36
RER1-202ENST00000378512 CDCA7Q9BWT1 371 aaPredicted RBP23.57■■□□□ 1.36
RER1-202ENST00000378512 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
RER1-202ENST00000378512 NLRP2Q9NX02 1062 aa23.57■■□□□ 1.36
RER1-202ENST00000378512 ANKRD24Q8TF21 1146 aa23.56■■□□□ 1.36
RER1-202ENST00000378512 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
RER1-202ENST00000378512 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
RER1-202ENST00000378512 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
RER1-202ENST00000378512 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
RER1-202ENST00000378512 EXOC5O00471 708 aa23.53■■□□□ 1.36
RER1-202ENST00000378512 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
RER1-202ENST00000378512 RGPD3A6NKT7 1758 aaPredicted RBP23.53■■□□□ 1.36
RER1-202ENST00000378512 RGPD4Q7Z3J3 1758 aa23.53■■□□□ 1.36
RER1-202ENST00000378512 BCL9O00512 1426 aa23.53■■□□□ 1.36
RER1-202ENST00000378512 PROM2Q8N271 834 aa23.52■■□□□ 1.36
RER1-202ENST00000378512 PLSCR1O15162 318 aa23.51■■□□□ 1.35
RER1-202ENST00000378512 KCNQ2O43526 872 aa23.51■■□□□ 1.35
RER1-202ENST00000378512 NBPF14Q5TI25 921 aa23.51■■□□□ 1.35
RER1-202ENST00000378512 KIF24Q5T7B8 1368 aa23.51■■□□□ 1.35
RER1-202ENST00000378512 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
RER1-202ENST00000378512 HOXC9P31274 260 aa23.5■■□□□ 1.35
RER1-202ENST00000378512 CGNL1Q0VF96 1302 aa23.5■■□□□ 1.35
RER1-202ENST00000378512 MAP2P11137 1827 aaKnown RBP23.5■■□□□ 1.35
RER1-202ENST00000378512 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
RER1-202ENST00000378512 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
RER1-202ENST00000378512 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
RER1-202ENST00000378512 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
RER1-202ENST00000378512 PANK3Q9H999 370 aa23.49■■□□□ 1.35
RER1-202ENST00000378512 IL2RBP14784 551 aa23.48■■□□□ 1.35
RER1-202ENST00000378512 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
RER1-202ENST00000378512 PDGFDQ9GZP0 370 aaPredicted RBP23.47■■□□□ 1.35
RER1-202ENST00000378512 NHSQ6T4R5 1651 aa23.46■■□□□ 1.35
RER1-202ENST00000378512 AMPHP49418 695 aa23.44■■□□□ 1.34
RER1-202ENST00000378512 NSD2O96028 1365 aa23.44■■□□□ 1.34
RER1-202ENST00000378512 INSRP06213 1382 aa23.44■■□□□ 1.34
RER1-202ENST00000378512 FLT4P35916 1363 aa23.44■■□□□ 1.34
RER1-202ENST00000378512 TXNRD1Q16881 649 aa23.42■■□□□ 1.34
RER1-202ENST00000378512 CASZ1Q86V15 1759 aa23.42■■□□□ 1.34
RER1-202ENST00000378512 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.34
RER1-202ENST00000378512 BTAF1O14981 1849 aa23.39■■□□□ 1.34
RER1-202ENST00000378512 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
RER1-202ENST00000378512 EMILIN1Q9Y6C2 1016 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms