RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
TRIM13-202ENST00000378182 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
TRIM13-202ENST00000378182 SERPINC1P01008 464 aa16.73■□□□□ 0.27
TRIM13-202ENST00000378182 GNAI2P04899 355 aa16.73■□□□□ 0.27
TRIM13-202ENST00000378182 ARGLU1Q9NWB6 273 aaPredicted RBP16.73■□□□□ 0.27
TRIM13-202ENST00000378182 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
TRIM13-202ENST00000378182 CDC45O75419 566 aa16.73■□□□□ 0.27
TRIM13-202ENST00000378182 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
TRIM13-202ENST00000378182 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
TRIM13-202ENST00000378182 CCDC181Q5TID7 509 aa16.72■□□□□ 0.27
TRIM13-202ENST00000378182 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
TRIM13-202ENST00000378182 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
TRIM13-202ENST00000378182 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
TRIM13-202ENST00000378182 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
TRIM13-202ENST00000378182 H0YHG0 523 aa16.72■□□□□ 0.27
TRIM13-202ENST00000378182 RRS1Q15050 365 aaKnown RBP16.72■□□□□ 0.27
TRIM13-202ENST00000378182 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
TRIM13-202ENST00000378182 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
TRIM13-202ENST00000378182 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
TRIM13-202ENST00000378182 ERLIN2O94905 339 aa16.71■□□□□ 0.27
TRIM13-202ENST00000378182 TRIM21P19474 475 aaKnown RBP16.71■□□□□ 0.27
TRIM13-202ENST00000378182 NUCB2P80303 420 aa16.71■□□□□ 0.27
TRIM13-202ENST00000378182 FIBPO43427 364 aa16.71■□□□□ 0.27
TRIM13-202ENST00000378182 DESP17661 470 aa16.71■□□□□ 0.27
TRIM13-202ENST00000378182 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
TRIM13-202ENST00000378182 STIM1Q13586 685 aa16.71■□□□□ 0.26
TRIM13-202ENST00000378182 ZNF396Q96N95 335 aaPredicted RBP16.71■□□□□ 0.26
TRIM13-202ENST00000378182 GSE1Q14687 1217 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 NEK4P51957 841 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 ANKLE2Q86XL3 938 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 AACSQ86V21 672 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 UBAC1Q9BSL1 405 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 HIP1O00291 1037 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 DHX8Q14562 1220 aaKnown RBP16.7■□□□□ 0.26
TRIM13-202ENST00000378182 TWISTNBQ3B726 338 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-202ENST00000378182 GNAI3P08754 354 aa16.7■□□□□ 0.26
TRIM13-202ENST00000378182 MINDY4BA8MYZ0 360 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 FAM193AP78312 1265 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
TRIM13-202ENST00000378182 NFKBIBQ15653 356 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 ME1P48163 572 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
TRIM13-202ENST00000378182 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
TRIM13-202ENST00000378182 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
TRIM13-202ENST00000378182 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
TRIM13-202ENST00000378182 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
TRIM13-202ENST00000378182 MPNDQ8N594 471 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 BCAR3O75815 825 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 CCDC96Q2M329 555 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 PPP4R3AQ6IN85 833 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 TSPYL1Q9H0U9 437 aa16.67■□□□□ 0.26
TRIM13-202ENST00000378182 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
TRIM13-202ENST00000378182 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
TRIM13-202ENST00000378182 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 ANAPC15P60006 121 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
TRIM13-202ENST00000378182 TNIP1Q15025 636 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
TRIM13-202ENST00000378182 STARD3NLO95772 234 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
TRIM13-202ENST00000378182 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRIM13-202ENST00000378182 TMOD3Q9NYL9 352 aa16.65■□□□□ 0.26
TRIM13-202ENST00000378182 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
TRIM13-202ENST00000378182 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
TRIM13-202ENST00000378182 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
TRIM13-202ENST00000378182 DZIP1Q86YF9 867 aaKnown RBP16.65■□□□□ 0.26
TRIM13-202ENST00000378182 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.26
TRIM13-202ENST00000378182 GOLGA6L10A6NI86 522 aa16.64■□□□□ 0.25
TRIM13-202ENST00000378182 ZNF652Q9Y2D9 606 aa16.64■□□□□ 0.25
TRIM13-202ENST00000378182 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
TRIM13-202ENST00000378182 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
TRIM13-202ENST00000378182 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
TRIM13-202ENST00000378182 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
TRIM13-202ENST00000378182 CYP46A1Q9Y6A2 500 aa16.63■□□□□ 0.25
TRIM13-202ENST00000378182 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
TRIM13-202ENST00000378182 CAVIN4Q5BKX8 364 aa16.63■□□□□ 0.25
TRIM13-202ENST00000378182 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
TRIM13-202ENST00000378182 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-202ENST00000378182 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
TRIM13-202ENST00000378182 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
TRIM13-202ENST00000378182 CEP57L1Q8IYX8 460 aa16.61■□□□□ 0.25
TRIM13-202ENST00000378182 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
TRIM13-202ENST00000378182 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-202ENST00000378182 TSPY26PQ9H489 355 aa16.61■□□□□ 0.25
TRIM13-202ENST00000378182 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
TRIM13-202ENST00000378182 HMGN5P82970 282 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 676.5 ms