RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GSPT1P15170 499 aaKnown RBP22.41■■□□□ 1.18
GNE-201ENST00000377902 EMILIN1Q9Y6C2 1016 aa22.41■■□□□ 1.18
GNE-201ENST00000377902 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
GNE-201ENST00000377902 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
GNE-201ENST00000377902 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
GNE-201ENST00000377902 NFE2L2Q16236 605 aa22.4■■□□□ 1.18
GNE-201ENST00000377902 C16orf71Q8IYS4 520 aaPredicted RBP22.4■■□□□ 1.18
GNE-201ENST00000377902 BRPF1P55201 1214 aaPredicted RBP22.39■■□□□ 1.17
GNE-201ENST00000377902 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
GNE-201ENST00000377902 AK9Q5TCS8 1911 aa22.39■■□□□ 1.17
GNE-201ENST00000377902 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
GNE-201ENST00000377902 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
GNE-201ENST00000377902 YTHDC2Q9H6S0 1430 aaKnown RBP22.38■■□□□ 1.17
GNE-201ENST00000377902 DCTN1Q14203 1278 aa22.38■■□□□ 1.17
GNE-201ENST00000377902 ANKRD26Q9UPS8 1709 aa22.38■■□□□ 1.17
GNE-201ENST00000377902 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
GNE-201ENST00000377902 TWISTNBQ3B726 338 aaPredicted RBP22.37■■□□□ 1.17
GNE-201ENST00000377902 TRIM44Q96DX7 344 aaPredicted RBP22.37■■□□□ 1.17
GNE-201ENST00000377902 FBXO31Q5XUX0 539 aaPredicted RBP22.37■■□□□ 1.17
GNE-201ENST00000377902 ABCC4O15439 1325 aa22.36■■□□□ 1.17
GNE-201ENST00000377902 ARHGAP45Q92619 1136 aa22.36■■□□□ 1.17
GNE-201ENST00000377902 PLEKHM2Q8IWE5 1019 aa22.35■■□□□ 1.17
GNE-201ENST00000377902 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
GNE-201ENST00000377902 CDC45O75419 566 aa22.35■■□□□ 1.17
GNE-201ENST00000377902 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
GNE-201ENST00000377902 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
GNE-201ENST00000377902 PIK3R4Q99570 1358 aa22.34■■□□□ 1.17
GNE-201ENST00000377902 SKOR2Q2VWA4 1001 aaPredicted RBP22.34■■□□□ 1.17
GNE-201ENST00000377902 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
GNE-201ENST00000377902 GNAI1P63096 354 aa22.34■■□□□ 1.17
GNE-201ENST00000377902 PKP1Q13835 747 aa22.34■■□□□ 1.17
GNE-201ENST00000377902 APBB1O00213 710 aa22.33■■□□□ 1.17
GNE-201ENST00000377902 BAG4O95429 457 aaKnown RBP22.33■■□□□ 1.17
GNE-201ENST00000377902 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
GNE-201ENST00000377902 SLC52A1Q9NWF4 448 aa22.33■■□□□ 1.17
GNE-201ENST00000377902 ZNF853P0CG23 659 aa22.33■■□□□ 1.16
GNE-201ENST00000377902 DDX49Q9Y6V7 483 aaKnown RBP22.33■■□□□ 1.16
GNE-201ENST00000377902 NME9Q86XW9 330 aa22.32■■□□□ 1.16
GNE-201ENST00000377902 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
GNE-201ENST00000377902 IL13P35225 146 aa22.32■■□□□ 1.16
GNE-201ENST00000377902 KRT24Q2M2I5 525 aa22.32■■□□□ 1.16
GNE-201ENST00000377902 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
GNE-201ENST00000377902 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
GNE-201ENST00000377902 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
GNE-201ENST00000377902 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
GNE-201ENST00000377902 KIF20BQ96Q89 1820 aa22.29■■□□□ 1.16
GNE-201ENST00000377902 SMARCA5O60264 1052 aaPredicted RBP22.29■■□□□ 1.16
GNE-201ENST00000377902 CHMP4BQ9H444 224 aaKnown RBP22.29■■□□□ 1.16
GNE-201ENST00000377902 NCKAP5LQ9HCH0 1330 aa22.29■■□□□ 1.16
GNE-201ENST00000377902 NASPP49321 788 aaPredicted RBP22.29■■□□□ 1.16
GNE-201ENST00000377902 NCLP19338 710 aaKnown RBP22.28■■□□□ 1.16
GNE-201ENST00000377902 CHAMP1Q96JM3 812 aa22.28■■□□□ 1.16
GNE-201ENST00000377902 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
GNE-201ENST00000377902 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
GNE-201ENST00000377902 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
GNE-201ENST00000377902 TTC22Q5TAA0 569 aa22.27■■□□□ 1.16
GNE-201ENST00000377902 DCTPP1Q9H773 170 aa22.27■■□□□ 1.16
GNE-201ENST00000377902 CLTCQ00610 1675 aaKnown RBP22.27■■□□□ 1.16
GNE-201ENST00000377902 CALD1Q05682 793 aaKnown RBP22.27■■□□□ 1.16
GNE-201ENST00000377902 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
GNE-201ENST00000377902 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
GNE-201ENST00000377902 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
GNE-201ENST00000377902 KLHL40Q2TBA0 621 aa22.26■■□□□ 1.15
GNE-201ENST00000377902 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
GNE-201ENST00000377902 STAG3Q9UJ98 1225 aa22.26■■□□□ 1.15
GNE-201ENST00000377902 ZGPATQ8N5A5 531 aaKnown RBP22.25■■□□□ 1.15
GNE-201ENST00000377902 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
GNE-201ENST00000377902 YEATS2Q9ULM3 1422 aa22.25■■□□□ 1.15
GNE-201ENST00000377902 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
GNE-201ENST00000377902 CAVIN1Q6NZI2 390 aaKnown RBP22.25■■□□□ 1.15
GNE-201ENST00000377902 DIP2CQ9Y2E4 1556 aa22.24■■□□□ 1.15
GNE-201ENST00000377902 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
GNE-201ENST00000377902 RABEP1Q15276 862 aa22.24■■□□□ 1.15
GNE-201ENST00000377902 CLEC17AQ6ZS10 378 aa22.24■■□□□ 1.15
GNE-201ENST00000377902 SDSP20132 328 aa22.23■■□□□ 1.15
GNE-201ENST00000377902 PTMSP20962 102 aa22.23■■□□□ 1.15
GNE-201ENST00000377902 CCDC173Q0VFZ6 552 aa22.21■■□□□ 1.15
GNE-201ENST00000377902 AEBP1Q8IUX7 1158 aa22.21■■□□□ 1.15
GNE-201ENST00000377902 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
GNE-201ENST00000377902 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
GNE-201ENST00000377902 LMBRD1Q9NUN5 540 aa22.21■■□□□ 1.15
GNE-201ENST00000377902 PPP1R9BQ96SB3 815 aa22.2■■□□□ 1.14
GNE-201ENST00000377902 RBM27Q9P2N5 1060 aaKnown RBP22.2■■□□□ 1.14
GNE-201ENST00000377902 ZSCAN23Q3MJ62 389 aa22.19■■□□□ 1.14
GNE-201ENST00000377902 FOXD4L5Q5VV16 416 aaPredicted RBP22.19■■□□□ 1.14
GNE-201ENST00000377902 CEP85Q6P2H3 762 aa22.19■■□□□ 1.14
GNE-201ENST00000377902 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
GNE-201ENST00000377902 FOXD4L4Q8WXT5 416 aaPredicted RBP22.19■■□□□ 1.14
GNE-201ENST00000377902 CYP2E1P05181 493 aaPredicted RBP22.19■■□□□ 1.14
GNE-201ENST00000377902 INTS3Q68E01 1043 aaKnown RBP22.19■■□□□ 1.14
GNE-201ENST00000377902 MEIS3Q99687 375 aa22.19■■□□□ 1.14
GNE-201ENST00000377902 PRPF40AO75400 957 aaKnown RBP22.18■■□□□ 1.14
GNE-201ENST00000377902 MCM10Q7L590 875 aa22.18■■□□□ 1.14
GNE-201ENST00000377902 ATP10DQ9P241 1426 aa22.18■■□□□ 1.14
GNE-201ENST00000377902 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
GNE-201ENST00000377902 RBSNQ9H1K0 784 aa22.17■■□□□ 1.14
GNE-201ENST00000377902 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
GNE-201ENST00000377902 MSH6P52701 1360 aa22.16■■□□□ 1.14
GNE-201ENST00000377902 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
GNE-201ENST00000377902 NUCB2P80303 420 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms