RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 PLEKHF1Q96S99 279 aa27.89■■■□□ 2.06
RNF38-205ENST00000377877 ZC3H6P61129 1189 aaKnown RBP27.87■■■□□ 2.05
RNF38-205ENST00000377877 ARHGEF10O15013 1369 aa27.87■■■□□ 2.05
RNF38-205ENST00000377877 IP6K1Q92551 441 aa27.86■■■□□ 2.05
RNF38-205ENST00000377877 KIF24Q5T7B8 1368 aa27.86■■■□□ 2.05
RNF38-205ENST00000377877 TCP11L2Q8N4U5 519 aa27.86■■■□□ 2.05
RNF38-205ENST00000377877 RSPH6AQ9H0K4 717 aa27.86■■■□□ 2.05
RNF38-205ENST00000377877 FCHSD2O94868 740 aa27.85■■■□□ 2.05
RNF38-205ENST00000377877 TOM1O60784 492 aa27.84■■■□□ 2.05
RNF38-205ENST00000377877 PIP4K2BP78356 416 aa27.84■■■□□ 2.05
RNF38-205ENST00000377877 RRP7AQ9Y3A4 280 aaKnown RBP27.84■■■□□ 2.05
RNF38-205ENST00000377877 LTV1Q96GA3 475 aaPredicted RBP27.83■■■□□ 2.05
RNF38-205ENST00000377877 PRKAR2BP31323 418 aa27.82■■■□□ 2.04
RNF38-205ENST00000377877 NEUROD2Q15784 382 aa27.82■■■□□ 2.04
RNF38-205ENST00000377877 AEBP1Q8IUX7 1158 aa27.82■■■□□ 2.04
RNF38-205ENST00000377877 AXIN2Q9Y2T1 843 aa27.81■■■□□ 2.04
RNF38-205ENST00000377877 UBAP1LF5GYI3 381 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 EYA1Q99502 592 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 CRYBG1Q9Y4K1 1723 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 PHRF1Q9P1Y6 1649 aaKnown RBP27.8■■■□□ 2.04
RNF38-205ENST00000377877 RTL1A6NKG5 1358 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 SULT6B1Q6IMI4 303 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 PHACTR3Q96KR7 559 aa27.8■■■□□ 2.04
RNF38-205ENST00000377877 MYT1Q01538 1121 aa27.79■■■□□ 2.04
RNF38-205ENST00000377877 CDCA7LQ96GN5 454 aa27.79■■■□□ 2.04
RNF38-205ENST00000377877 RGPD1P0DJD0 1748 aa27.78■■■□□ 2.04
RNF38-205ENST00000377877 IQSEC2Q5JU85 1478 aa27.78■■■□□ 2.04
RNF38-205ENST00000377877 CERKQ8TCT0 537 aa27.78■■■□□ 2.04
RNF38-205ENST00000377877 ZNF521Q96K83 1311 aa27.77■■■□□ 2.04
RNF38-205ENST00000377877 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
RNF38-205ENST00000377877 PNNQ9H307 717 aaKnown RBP27.77■■■□□ 2.04
RNF38-205ENST00000377877 AHDC1Q5TGY3 1603 aaPredicted RBP27.76■■■□□ 2.03
RNF38-205ENST00000377877 TMPOP42166 694 aaKnown RBP27.75■■■□□ 2.03
RNF38-205ENST00000377877 CHRNA2Q15822 529 aa27.75■■■□□ 2.03
RNF38-205ENST00000377877 MAPK8IP3Q9UPT6 1336 aa27.74■■■□□ 2.03
RNF38-205ENST00000377877 IGSF1Q8N6C5 1336 aa27.74■■■□□ 2.03
RNF38-205ENST00000377877 RGPD5Q99666 1765 aa27.73■■■□□ 2.03
RNF38-205ENST00000377877 KIAA0232Q92628 1395 aa27.73■■■□□ 2.03
RNF38-205ENST00000377877 WWC1Q8IX03 1113 aa27.73■■■□□ 2.03
RNF38-205ENST00000377877 NBPF6Q5VWK0 638 aa27.71■■■□□ 2.03
RNF38-205ENST00000377877 NBPF4Q96M43 638 aa27.71■■■□□ 2.03
RNF38-205ENST00000377877 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
RNF38-205ENST00000377877 NGEFQ8N5V2 710 aa27.71■■■□□ 2.03
RNF38-205ENST00000377877 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
RNF38-205ENST00000377877 COL18A1P39060 1754 aa27.7■■■□□ 2.03
RNF38-205ENST00000377877 USHBP1Q8N6Y0 703 aa27.7■■■□□ 2.03
RNF38-205ENST00000377877 ANKRD24Q8TF21 1146 aa27.7■■■□□ 2.03
RNF38-205ENST00000377877 HAP1P54257 671 aaPredicted RBP27.69■■■□□ 2.02
RNF38-205ENST00000377877 SPINK5Q9NQ38 1064 aaPredicted RBP27.69■■■□□ 2.02
RNF38-205ENST00000377877 CPDO75976 1380 aa27.69■■■□□ 2.02
RNF38-205ENST00000377877 RGPD2P0DJD1 1756 aa27.68■■■□□ 2.02
RNF38-205ENST00000377877 RIPK4P57078 832 aa27.68■■■□□ 2.02
RNF38-205ENST00000377877 TRIM35Q9UPQ4 493 aa27.68■■■□□ 2.02
RNF38-205ENST00000377877 PHLPP1O60346 1717 aa27.68■■■□□ 2.02
RNF38-205ENST00000377877 KDRP35968 1356 aa27.67■■■□□ 2.02
RNF38-205ENST00000377877 GOLGA2Q08379 1002 aa27.67■■■□□ 2.02
RNF38-205ENST00000377877 ABCA3Q99758 1704 aa27.67■■■□□ 2.02
RNF38-205ENST00000377877 NEFMP07197 916 aa27.66■■■□□ 2.02
RNF38-205ENST00000377877 CCDC27Q2M243 656 aa27.66■■■□□ 2.02
RNF38-205ENST00000377877 NCBP3Q53F19 620 aaKnown RBP27.66■■■□□ 2.02
RNF38-205ENST00000377877 COL16A1Q07092 1604 aaPredicted RBP27.65■■■□□ 2.02
RNF38-205ENST00000377877 NFE2L2Q16236 605 aa27.65■■■□□ 2.02
RNF38-205ENST00000377877 PRDM11Q9NQV5 511 aa27.64■■■□□ 2.02
RNF38-205ENST00000377877 ERBB3P21860 1342 aa27.63■■■□□ 2.01
RNF38-205ENST00000377877 SLFN5Q08AF3 891 aa27.63■■■□□ 2.01
RNF38-205ENST00000377877 FAM83GA6ND36 823 aa27.61■■■□□ 2.01
RNF38-205ENST00000377877 TRMT2AQ8IZ69 625 aaKnown RBP27.6■■■□□ 2.01
RNF38-205ENST00000377877 DUSP27Q5VZP5 1158 aa27.59■■■□□ 2.01
RNF38-205ENST00000377877 WDR63Q8IWG1 891 aa27.59■■■□□ 2.01
RNF38-205ENST00000377877 MTHFSDQ2M296 383 aaKnown RBP27.59■■■□□ 2.01
RNF38-205ENST00000377877 DLG5Q8TDM6 1919 aa27.58■■■□□ 2.01
RNF38-205ENST00000377877 CAMTA1Q9Y6Y1 1673 aa27.58■■■□□ 2.01
RNF38-205ENST00000377877 COL22A1Q8NFW1 1626 aaPredicted RBP27.58■■■□□ 2
RNF38-205ENST00000377877 NEFLP07196 543 aa27.56■■■□□ 2
RNF38-205ENST00000377877 NLRP2Q9NX02 1062 aa27.56■■■□□ 2
RNF38-205ENST00000377877 THUMPD2Q9BTF0 503 aaKnown RBP27.55■■■□□ 2
RNF38-205ENST00000377877 ABCC6O95255 1503 aa27.55■■■□□ 2
RNF38-205ENST00000377877 E9PSI1 815 aa27.55■■■□□ 2
RNF38-205ENST00000377877 CSB-PGBD3P0DP91 1061 aa27.55■■■□□ 2
RNF38-205ENST00000377877 LMO7Q8WWI1 1683 aa27.54■■■□□ 2
RNF38-205ENST00000377877 NCAPD2Q15021 1401 aa27.53■■■□□ 2
RNF38-205ENST00000377877 DCTN1Q14203 1278 aa27.53■■■□□ 2
RNF38-205ENST00000377877 FKBP8Q14318 412 aa27.52■■■□□ 2
RNF38-205ENST00000377877 NUTM2BA6NNL0 878 aaPredicted RBP27.49■■□□□ 1.99
RNF38-205ENST00000377877 NUTM2EB1AL46 878 aaPredicted RBP27.49■■□□□ 1.99
RNF38-205ENST00000377877 NUTM2AQ8IVF1 878 aaPredicted RBP27.49■■□□□ 1.99
RNF38-205ENST00000377877 COL5A2P05997 1499 aaPredicted RBP27.48■■□□□ 1.99
RNF38-205ENST00000377877 ADAMTS2O95450 1211 aa27.48■■□□□ 1.99
RNF38-205ENST00000377877 TSHZ2Q9NRE2 1034 aa27.48■■□□□ 1.99
RNF38-205ENST00000377877 STRN4Q9NRL3 753 aa27.48■■□□□ 1.99
RNF38-205ENST00000377877 GAS2L2Q8NHY3 880 aa27.48■■□□□ 1.99
RNF38-205ENST00000377877 BTG4Q9NY30 223 aa27.48■■□□□ 1.99
RNF38-205ENST00000377877 WDR17Q8IZU2 1322 aa27.47■■□□□ 1.99
RNF38-205ENST00000377877 MCM10Q7L590 875 aa27.47■■□□□ 1.99
RNF38-205ENST00000377877 EVA1CP58658 441 aa27.46■■□□□ 1.99
RNF38-205ENST00000377877 LMOD3Q0VAK6 560 aa27.46■■□□□ 1.99
RNF38-205ENST00000377877 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.98
RNF38-205ENST00000377877 LARP1Q6PKG0 1096 aaKnown RBP27.45■■□□□ 1.98
RNF38-205ENST00000377877 TSR2Q969E8 191 aaKnown RBP27.45■■□□□ 1.98
RNF38-205ENST00000377877 IL16Q14005 1332 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms