RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
PCDH9-202ENST00000377865 HS1BP3Q53T59 392 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
PCDH9-202ENST00000377865 ANKRD1Q15327 319 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 KDM6BO15054 1643 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 BAG4O95429 457 aaKnown RBP10.51□□□□□ -0.73
PCDH9-202ENST00000377865 C1orf141Q5JVX7 400 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 DYNC1I1O14576 645 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 NEXNQ0ZGT2 675 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 TAF3Q5VWG9 929 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 ATP10BO94823 1461 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 A2MP01023 1474 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 SYCE3A1L190 88 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 UVSSAQ2YD98 709 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 TRIM5Q9C035 493 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 SLC52A1Q9NWF4 448 aa10.51□□□□□ -0.73
PCDH9-202ENST00000377865 ABCC2Q92887 1545 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 TEFQ10587 303 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 CCDC183Q5T5S1 534 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 TPM1P09493 284 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 PDCL2Q8N4E4 241 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 ARHGEF5Q12774 1597 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 HOMER1Q86YM7 354 aa10.5□□□□□ -0.73
PCDH9-202ENST00000377865 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
PCDH9-202ENST00000377865 ZNF692Q9BU19 519 aaPredicted RBP10.49□□□□□ -0.73
PCDH9-202ENST00000377865 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 CYP46A1Q9Y6A2 500 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 RTEL1-TNFRSF6BF6WH68 1400 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 FIBPO43427 364 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 KRT85P78386 507 aa10.49□□□□□ -0.73
PCDH9-202ENST00000377865 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
PCDH9-202ENST00000377865 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
PCDH9-202ENST00000377865 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
PCDH9-202ENST00000377865 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
PCDH9-202ENST00000377865 ZSCAN23Q3MJ62 389 aa10.48□□□□□ -0.73
PCDH9-202ENST00000377865 ZNF396Q96N95 335 aaPredicted RBP10.48□□□□□ -0.73
PCDH9-202ENST00000377865 NOS1P29475 1434 aa10.48□□□□□ -0.73
PCDH9-202ENST00000377865 EIF2S2P20042 333 aaKnown RBP10.48□□□□□ -0.73
PCDH9-202ENST00000377865 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
PCDH9-202ENST00000377865 ADGRF5Q8IZF2 1346 aa10.48□□□□□ -0.73
PCDH9-202ENST00000377865 SYNMO15061 1565 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 POLR1AO95602 1720 aaPredicted RBP10.47□□□□□ -0.73
PCDH9-202ENST00000377865 TTC22Q5TAA0 569 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 LRSAM1Q6UWE0 723 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
PCDH9-202ENST00000377865 ZNF608Q9ULD9 1512 aaPredicted RBP10.47□□□□□ -0.73
PCDH9-202ENST00000377865 PTPRCP08575 1304 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
PCDH9-202ENST00000377865 TAF7LQ5H9L4 462 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 CCDC112Q8NEF3 446 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 PRIMPOLQ96LW4 560 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 TNMDQ9H2S6 317 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 ACBD3Q9H3P7 528 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 DISP1Q96F81 1524 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 TRIM29Q14134 588 aa10.47□□□□□ -0.73
PCDH9-202ENST00000377865 CWC15Q9P013 229 aaKnown RBP10.47□□□□□ -0.73
PCDH9-202ENST00000377865 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.73
PCDH9-202ENST00000377865 ADGRL1O94910 1474 aa10.46□□□□□ -0.73
PCDH9-202ENST00000377865 KDM5BQ9UGL1 1544 aa10.46□□□□□ -0.73
PCDH9-202ENST00000377865 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.73
PCDH9-202ENST00000377865 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
PCDH9-202ENST00000377865 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
PCDH9-202ENST00000377865 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
PCDH9-202ENST00000377865 RAB11FIP3O75154 756 aa10.46□□□□□ -0.74
PCDH9-202ENST00000377865 NECTIN2Q92692 538 aa10.46□□□□□ -0.74
PCDH9-202ENST00000377865 NUP62CLQ9H1M0 184 aa10.46□□□□□ -0.74
PCDH9-202ENST00000377865 PPP6R1Q9UPN7 881 aa10.46□□□□□ -0.74
PCDH9-202ENST00000377865 KINO60870 393 aaKnown RBP10.46□□□□□ -0.74
PCDH9-202ENST00000377865 SPC24Q8NBT2 197 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 PLCH2O75038 1416 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 XPCQ01831 940 aaPredicted RBP10.45□□□□□ -0.74
PCDH9-202ENST00000377865 CEP170Q5SW79 1584 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 PDRG1Q9NUG6 133 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 MX1P20591 662 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
PCDH9-202ENST00000377865 TSR1Q2NL82 804 aaKnown RBP10.45□□□□□ -0.74
PCDH9-202ENST00000377865 EIF4G3O43432 1585 aaKnown RBP10.45□□□□□ -0.74
PCDH9-202ENST00000377865 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 CPLX1O14810 134 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
PCDH9-202ENST00000377865 KIF2AO00139 706 aaPredicted RBP10.44□□□□□ -0.74
PCDH9-202ENST00000377865 OFD1O75665 1012 aa10.44□□□□□ -0.74
PCDH9-202ENST00000377865 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
PCDH9-202ENST00000377865 SYNE3Q6ZMZ3 975 aa10.44□□□□□ -0.74
PCDH9-202ENST00000377865 SH2B1Q9NRF2 756 aaPredicted RBP10.44□□□□□ -0.74
PCDH9-202ENST00000377865 SEC24BO95487 1268 aa10.43□□□□□ -0.74
PCDH9-202ENST00000377865 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
PCDH9-202ENST00000377865 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms