RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
SF1-203ENST00000377387 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
SF1-203ENST00000377387 PPIP5K1Q6PFW1 1433 aa22.69■■□□□ 1.22
SF1-203ENST00000377387 COG3Q96JB2 828 aa22.69■■□□□ 1.22
SF1-203ENST00000377387 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
SF1-203ENST00000377387 WASLO00401 505 aaPredicted RBP22.68■■□□□ 1.22
SF1-203ENST00000377387 CLTCQ00610 1675 aaKnown RBP22.68■■□□□ 1.22
SF1-203ENST00000377387 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
SF1-203ENST00000377387 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
SF1-203ENST00000377387 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
SF1-203ENST00000377387 RBM42Q9BTD8 480 aaKnown RBP22.68■■□□□ 1.22
SF1-203ENST00000377387 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
SF1-203ENST00000377387 MAP2P11137 1827 aaKnown RBP22.67■■□□□ 1.22
SF1-203ENST00000377387 METP08581 1390 aa22.67■■□□□ 1.22
SF1-203ENST00000377387 APBB1O00213 710 aa22.67■■□□□ 1.22
SF1-203ENST00000377387 TRAK2O60296 914 aa22.67■■□□□ 1.22
SF1-203ENST00000377387 HSP90AA1P07900 732 aaKnown RBP22.67■■□□□ 1.22
SF1-203ENST00000377387 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
SF1-203ENST00000377387 DIP2BQ9P265 1576 aa22.66■■□□□ 1.22
SF1-203ENST00000377387 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
SF1-203ENST00000377387 ANKRD26Q9UPS8 1709 aa22.66■■□□□ 1.22
SF1-203ENST00000377387 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
SF1-203ENST00000377387 A2ML1A8K2U0 1454 aa22.65■■□□□ 1.22
SF1-203ENST00000377387 GOLGA6L3A6NEY3 463 aa22.64■■□□□ 1.21
SF1-203ENST00000377387 BMP2KLQ5H9B9 411 aa22.64■■□□□ 1.21
SF1-203ENST00000377387 L1TD1Q5T7N2 865 aaKnown RBP22.64■■□□□ 1.21
SF1-203ENST00000377387 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.21
SF1-203ENST00000377387 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
SF1-203ENST00000377387 PANK2Q9BZ23 570 aa22.64■■□□□ 1.21
SF1-203ENST00000377387 CD2BP2O95400 341 aaKnown RBP22.64■■□□□ 1.21
SF1-203ENST00000377387 EIF5BO60841 1220 aaKnown RBP22.63■■□□□ 1.21
SF1-203ENST00000377387 RBM25P49756 843 aaKnown RBP22.63■■□□□ 1.21
SF1-203ENST00000377387 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
SF1-203ENST00000377387 KIF20BQ96Q89 1820 aa22.63■■□□□ 1.21
SF1-203ENST00000377387 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
SF1-203ENST00000377387 XRCC6P12956 609 aaKnown RBP eCLIP22.62■■□□□ 1.211e-7■■■□□ 17.8
SF1-203ENST00000377387 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
SF1-203ENST00000377387 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
SF1-203ENST00000377387 SULT6B1Q6IMI4 303 aa22.61■■□□□ 1.21
SF1-203ENST00000377387 C16orf71Q8IYS4 520 aaPredicted RBP22.61■■□□□ 1.21
SF1-203ENST00000377387 ARHGAP45Q92619 1136 aa22.61■■□□□ 1.21
SF1-203ENST00000377387 MCM10Q7L590 875 aa22.61■■□□□ 1.21
SF1-203ENST00000377387 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
SF1-203ENST00000377387 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
SF1-203ENST00000377387 BRPF1P55201 1214 aaPredicted RBP22.6■■□□□ 1.21
SF1-203ENST00000377387 KIF2CQ99661 725 aa22.59■■□□□ 1.21
SF1-203ENST00000377387 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
SF1-203ENST00000377387 ABCC4O15439 1325 aa22.58■■□□□ 1.21
SF1-203ENST00000377387 TNPO1Q92973 898 aaKnown RBP22.58■■□□□ 1.21
SF1-203ENST00000377387 FAM43AQ8N2R8 423 aa22.58■■□□□ 1.2
SF1-203ENST00000377387 API5Q9BZZ5 524 aaKnown RBP22.58■■□□□ 1.2
SF1-203ENST00000377387 MIS18AQ9NYP9 233 aa22.58■■□□□ 1.2
SF1-203ENST00000377387 ATP7BP35670 1465 aa22.57■■□□□ 1.2
SF1-203ENST00000377387 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
SF1-203ENST00000377387 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
SF1-203ENST00000377387 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
SF1-203ENST00000377387 RRAGDQ9NQL2 400 aaPredicted RBP22.56■■□□□ 1.2
SF1-203ENST00000377387 OTUD7AQ8TE49 926 aaPredicted RBP22.55■■□□□ 1.2
SF1-203ENST00000377387 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
SF1-203ENST00000377387 CPS1P31327 1500 aa22.55■■□□□ 1.2
SF1-203ENST00000377387 SMARCA5O60264 1052 aaPredicted RBP22.54■■□□□ 1.2
SF1-203ENST00000377387 GSPT1P15170 499 aaKnown RBP22.54■■□□□ 1.2
SF1-203ENST00000377387 SNX21Q969T3 373 aa22.54■■□□□ 1.2
SF1-203ENST00000377387 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
SF1-203ENST00000377387 EIF4A2Q14240 407 aaKnown RBP22.54■■□□□ 1.2
SF1-203ENST00000377387 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
SF1-203ENST00000377387 HSP90AB2PQ58FF8 381 aa22.53■■□□□ 1.2
SF1-203ENST00000377387 PLEKHM2Q8IWE5 1019 aa22.52■■□□□ 1.2
SF1-203ENST00000377387 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
SF1-203ENST00000377387 DDX11L8A8MPP1 907 aa22.52■■□□□ 1.2
SF1-203ENST00000377387 CDC45O75419 566 aa22.52■■□□□ 1.2
SF1-203ENST00000377387 FSD2A1L4K1 749 aa22.51■■□□□ 1.19
SF1-203ENST00000377387 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
SF1-203ENST00000377387 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
SF1-203ENST00000377387 K7ELQ4 463 aaPredicted RBP22.5■■□□□ 1.19
SF1-203ENST00000377387 DDIT3P35638 169 aa22.5■■□□□ 1.19
SF1-203ENST00000377387 SLC4A10Q6U841 1118 aa22.5■■□□□ 1.19
SF1-203ENST00000377387 CDK12Q9NYV4 1490 aaPredicted RBP22.49■■□□□ 1.19
SF1-203ENST00000377387 FOXO3O43524 673 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 LTKP29376 864 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 SSFA2P28290 1259 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 MEIS3Q99687 375 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 DCTPP1Q9H773 170 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
SF1-203ENST00000377387 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
SF1-203ENST00000377387 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
SF1-203ENST00000377387 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
SF1-203ENST00000377387 SPATA31D1Q6ZQQ2 1576 aa22.47■■□□□ 1.19
SF1-203ENST00000377387 GBP4Q96PP9 640 aa22.47■■□□□ 1.19
SF1-203ENST00000377387 ACEP12821 1306 aa22.47■■□□□ 1.19
SF1-203ENST00000377387 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
SF1-203ENST00000377387 F6X3S4 739 aa22.46■■□□□ 1.19
SF1-203ENST00000377387 RAB3GAP1Q15042 981 aa22.46■■□□□ 1.19
SF1-203ENST00000377387 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
SF1-203ENST00000377387 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
SF1-203ENST00000377387 TTC21BQ7Z4L5 1316 aa22.45■■□□□ 1.18
SF1-203ENST00000377387 TTC22Q5TAA0 569 aa22.44■■□□□ 1.18
SF1-203ENST00000377387 GRPEL1Q9HAV7 217 aa22.44■■□□□ 1.18
SF1-203ENST00000377387 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
SF1-203ENST00000377387 NRXN3Q9Y4C0 1643 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms