RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBA1-202ENST00000377269 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
UBA1-202ENST00000377269 PKNOX2Q96KN3 472 aa18.89■□□□□ 0.61
UBA1-202ENST00000377269 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
UBA1-202ENST00000377269 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
UBA1-202ENST00000377269 KIF1AQ12756 1690 aa18.88■□□□□ 0.61
UBA1-202ENST00000377269 MAP3K19Q56UN5 1328 aa18.87■□□□□ 0.61
UBA1-202ENST00000377269 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
UBA1-202ENST00000377269 PNPLA6Q8IY17 1366 aa18.86■□□□□ 0.61
UBA1-202ENST00000377269 PXDNQ92626 1479 aa18.85■□□□□ 0.61
UBA1-202ENST00000377269 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
UBA1-202ENST00000377269 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
UBA1-202ENST00000377269 DAXXQ9UER7 740 aaPredicted RBP18.85■□□□□ 0.61
UBA1-202ENST00000377269 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
UBA1-202ENST00000377269 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
UBA1-202ENST00000377269 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
UBA1-202ENST00000377269 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
UBA1-202ENST00000377269 TRPM3Q9HCF6 1732 aaPredicted RBP18.84■□□□□ 0.61
UBA1-202ENST00000377269 DIAPH1O60610 1272 aaKnown RBP18.84■□□□□ 0.61
UBA1-202ENST00000377269 SPATA31A3Q5VYP0 1347 aa18.83■□□□□ 0.61
UBA1-202ENST00000377269 GCP02774 474 aa18.83■□□□□ 0.6
UBA1-202ENST00000377269 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
UBA1-202ENST00000377269 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
UBA1-202ENST00000377269 MARF1Q9Y4F3 1742 aaKnown RBP18.83■□□□□ 0.6
UBA1-202ENST00000377269 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.6
UBA1-202ENST00000377269 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
UBA1-202ENST00000377269 FRAT2O75474 233 aaPredicted RBP18.82■□□□□ 0.6
UBA1-202ENST00000377269 PIP4K2BP78356 416 aa18.82■□□□□ 0.6
UBA1-202ENST00000377269 SBNO1A3KN83 1393 aa18.82■□□□□ 0.6
UBA1-202ENST00000377269 AMPHP49418 695 aa18.81■□□□□ 0.6
UBA1-202ENST00000377269 INSRP06213 1382 aa18.81■□□□□ 0.6
UBA1-202ENST00000377269 IL13P35225 146 aa18.8■□□□□ 0.6
UBA1-202ENST00000377269 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
UBA1-202ENST00000377269 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
UBA1-202ENST00000377269 GLIPR1L2Q4G1C9 344 aa18.79■□□□□ 0.6
UBA1-202ENST00000377269 USP19O94966 1318 aa18.79■□□□□ 0.6
UBA1-202ENST00000377269 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
UBA1-202ENST00000377269 ZC3H6P61129 1189 aaKnown RBP18.79■□□□□ 0.6
UBA1-202ENST00000377269 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
UBA1-202ENST00000377269 BLMP54132 1417 aaPredicted RBP18.79■□□□□ 0.6
UBA1-202ENST00000377269 PEAK1Q9H792 1746 aa18.78■□□□□ 0.6
UBA1-202ENST00000377269 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
UBA1-202ENST00000377269 KDM2BQ8NHM5 1336 aa18.77■□□□□ 0.6
UBA1-202ENST00000377269 UBAP1LF5GYI3 381 aa18.77■□□□□ 0.6
UBA1-202ENST00000377269 HMOX1P09601 288 aa18.77■□□□□ 0.6
UBA1-202ENST00000377269 SKAP1Q86WV1 359 aa18.77■□□□□ 0.6
UBA1-202ENST00000377269 ALS2Q96Q42 1657 aa18.77■□□□□ 0.6
UBA1-202ENST00000377269 APAF1O14727 1248 aa18.77■□□□□ 0.59
UBA1-202ENST00000377269 TOM1O60784 492 aa18.77■□□□□ 0.59
UBA1-202ENST00000377269 HOXC9P31274 260 aa18.77■□□□□ 0.59
UBA1-202ENST00000377269 NFAT5O94916 1531 aa18.77■□□□□ 0.59
UBA1-202ENST00000377269 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
UBA1-202ENST00000377269 FLT4P35916 1363 aa18.76■□□□□ 0.59
UBA1-202ENST00000377269 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
UBA1-202ENST00000377269 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
UBA1-202ENST00000377269 ROBO1Q9Y6N7 1651 aa18.75■□□□□ 0.59
UBA1-202ENST00000377269 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
UBA1-202ENST00000377269 CRBNQ96SW2 442 aa18.75■□□□□ 0.59
UBA1-202ENST00000377269 USP54Q70EL1 1684 aa18.75■□□□□ 0.59
UBA1-202ENST00000377269 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
UBA1-202ENST00000377269 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
UBA1-202ENST00000377269 RRP7AQ9Y3A4 280 aaKnown RBP18.74■□□□□ 0.59
UBA1-202ENST00000377269 SLIT3O75094 1523 aa18.74■□□□□ 0.59
UBA1-202ENST00000377269 ARHGEF10O15013 1369 aa18.73■□□□□ 0.59
UBA1-202ENST00000377269 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
UBA1-202ENST00000377269 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
UBA1-202ENST00000377269 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
UBA1-202ENST00000377269 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
UBA1-202ENST00000377269 IP6K1Q92551 441 aa18.72■□□□□ 0.59
UBA1-202ENST00000377269 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
UBA1-202ENST00000377269 PLIN1O60240 522 aa18.72■□□□□ 0.59
UBA1-202ENST00000377269 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
UBA1-202ENST00000377269 CENPQQ7L2Z9 268 aaPredicted RBP18.71■□□□□ 0.59
UBA1-202ENST00000377269 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
UBA1-202ENST00000377269 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
UBA1-202ENST00000377269 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.59
UBA1-202ENST00000377269 PRKAR2BP31323 418 aa18.71■□□□□ 0.58
UBA1-202ENST00000377269 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
UBA1-202ENST00000377269 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
UBA1-202ENST00000377269 EYA1Q99502 592 aa18.69■□□□□ 0.58
UBA1-202ENST00000377269 LRRC59Q96AG4 307 aaKnown RBP18.69■□□□□ 0.58
UBA1-202ENST00000377269 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
UBA1-202ENST00000377269 FCHSD2O94868 740 aa18.68■□□□□ 0.58
UBA1-202ENST00000377269 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
UBA1-202ENST00000377269 KIF24Q5T7B8 1368 aa18.67■□□□□ 0.58
UBA1-202ENST00000377269 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
UBA1-202ENST00000377269 L1TD1Q5T7N2 865 aaKnown RBP18.67■□□□□ 0.58
UBA1-202ENST00000377269 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
UBA1-202ENST00000377269 LTN1O94822 1766 aa18.66■□□□□ 0.58
UBA1-202ENST00000377269 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
UBA1-202ENST00000377269 ZMYND15Q9H091 742 aa18.65■□□□□ 0.58
UBA1-202ENST00000377269 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
UBA1-202ENST00000377269 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
UBA1-202ENST00000377269 AHDC1Q5TGY3 1603 aaPredicted RBP18.65■□□□□ 0.58
UBA1-202ENST00000377269 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
UBA1-202ENST00000377269 ANKRD24Q8TF21 1146 aa18.64■□□□□ 0.57
UBA1-202ENST00000377269 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
UBA1-202ENST00000377269 PRDM11Q9NQV5 511 aa18.63■□□□□ 0.57
UBA1-202ENST00000377269 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
UBA1-202ENST00000377269 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms