RNA–Protein interactions for RNA: ENST00000377111.6

TRPM3-210, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best) BASIC

Gene TRPM3, Length 4,618 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-210ENST00000377111 KIAA0754O94854 1291 aa10.46□□□□□ -0.73
TRPM3-210ENST00000377111 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRPM3-210ENST00000377111 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
TRPM3-210ENST00000377111 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRPM3-210ENST00000377111 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.73
TRPM3-210ENST00000377111 NEFHP12036 1026 aa10.46□□□□□ -0.73
TRPM3-210ENST00000377111 GTF2A1P52655 376 aaPredicted RBP10.46□□□□□ -0.73
TRPM3-210ENST00000377111 SENP3Q9H4L4 574 aaPredicted RBP10.46□□□□□ -0.73
TRPM3-210ENST00000377111 CLGNO14967 610 aa10.46□□□□□ -0.74
TRPM3-210ENST00000377111 MYO6Q9UM54 1294 aa10.46□□□□□ -0.74
TRPM3-210ENST00000377111 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 CERS3Q8IU89 383 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 AKAP17AQ02040 695 aaKnown RBP10.45□□□□□ -0.74
TRPM3-210ENST00000377111 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 RABEP1Q15276 862 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
TRPM3-210ENST00000377111 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 DZIP1LQ8IYY4 767 aaKnown RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 PIBF1Q8WXW3 757 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 RBM27Q9P2N5 1060 aaKnown RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 DDX19BQ9UMR2 479 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 NKTRP30414 1462 aaKnown RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 ZBTB22O15209 634 aa10.44□□□□□ -0.74
TRPM3-210ENST00000377111 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 AXDND1Q5T1B0 1012 aaPredicted RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
TRPM3-210ENST00000377111 ATP2B3Q16720 1220 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 REC8O95072 547 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
TRPM3-210ENST00000377111 RRP7AQ9Y3A4 280 aaKnown RBP10.43□□□□□ -0.74
TRPM3-210ENST00000377111 CCDC141Q6ZP82 1450 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 ANKRD45Q5TZF3 282 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
TRPM3-210ENST00000377111 CTR9Q6PD62 1173 aa10.43□□□□□ -0.74
TRPM3-210ENST00000377111 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
TRPM3-210ENST00000377111 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
TRPM3-210ENST00000377111 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
TRPM3-210ENST00000377111 IBTKQ9P2D0 1353 aaPredicted RBP10.42□□□□□ -0.74
TRPM3-210ENST00000377111 GTF2F1P35269 517 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRPM3-210ENST00000377111 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
TRPM3-210ENST00000377111 MEX3CQ5U5Q3 659 aaKnown RBP10.42□□□□□ -0.74
TRPM3-210ENST00000377111 GPRASP1Q5JY77 1395 aa10.42□□□□□ -0.74
TRPM3-210ENST00000377111 CCP110O43303 1012 aa10.42□□□□□ -0.74
TRPM3-210ENST00000377111 TTC12Q9H892 705 aaPredicted RBP10.42□□□□□ -0.74
TRPM3-210ENST00000377111 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 CCDC73Q6ZRK6 1079 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 NAP1L1P55209 391 aaKnown RBP10.41□□□□□ -0.74
TRPM3-210ENST00000377111 TRIM29Q14134 588 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 CT47A1Q5JQC4 288 aaPredicted RBP10.41□□□□□ -0.74
TRPM3-210ENST00000377111 EFCAB2Q5VUJ9 269 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 SYNE3Q6ZMZ3 975 aa10.41□□□□□ -0.74
TRPM3-210ENST00000377111 SPAG9O60271 1321 aaKnown RBP10.41□□□□□ -0.74
TRPM3-210ENST00000377111 ADCY5O95622 1261 aa10.4□□□□□ -0.74
TRPM3-210ENST00000377111 ZKSCAN1P17029 563 aaPredicted RBP10.4□□□□□ -0.74
TRPM3-210ENST00000377111 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
TRPM3-210ENST00000377111 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
TRPM3-210ENST00000377111 CDC45O75419 566 aa10.4□□□□□ -0.75
TRPM3-210ENST00000377111 FAM69CQ0P6D2 419 aa10.4□□□□□ -0.75
TRPM3-210ENST00000377111 ODF2Q5BJF6 829 aa10.4□□□□□ -0.75
TRPM3-210ENST00000377111 NAT10Q9H0A0 1025 aaKnown RBP10.4□□□□□ -0.75
TRPM3-210ENST00000377111 CEP170Q5SW79 1584 aa10.4□□□□□ -0.75
TRPM3-210ENST00000377111 A2MP01023 1474 aa10.39□□□□□ -0.75
TRPM3-210ENST00000377111 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
TRPM3-210ENST00000377111 EIF3JO75822 258 aaKnown RBP10.39□□□□□ -0.75
TRPM3-210ENST00000377111 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
TRPM3-210ENST00000377111 DHX8Q14562 1220 aaKnown RBP10.39□□□□□ -0.75
TRPM3-210ENST00000377111 GIMAP7Q8NHV1 300 aa10.39□□□□□ -0.75
TRPM3-210ENST00000377111 SECISBP2LQ93073 1101 aaKnown RBP10.39□□□□□ -0.75
TRPM3-210ENST00000377111 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
TRPM3-210ENST00000377111 LRRFIP1Q32MZ4 808 aaKnown RBP10.38□□□□□ -0.75
TRPM3-210ENST00000377111 NUP160Q12769 1436 aa10.38□□□□□ -0.75
TRPM3-210ENST00000377111 MVPQ14764 893 aaKnown RBP10.38□□□□□ -0.75
TRPM3-210ENST00000377111 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
TRPM3-210ENST00000377111 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
TRPM3-210ENST00000377111 CHMP3Q9Y3E7 222 aa10.38□□□□□ -0.75
TRPM3-210ENST00000377111 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
TRPM3-210ENST00000377111 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
TRPM3-210ENST00000377111 GOLGA6L10A6NI86 522 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 CPLX1O14810 134 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 TNNT1P13805 278 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 HDGFL2Q7Z4V5 671 aaPredicted RBP10.37□□□□□ -0.75
TRPM3-210ENST00000377111 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 PAXBP1Q9Y5B6 917 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 ERLIN1O75477 346 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
TRPM3-210ENST00000377111 ARHGAP5Q13017 1502 aa10.37□□□□□ -0.75
TRPM3-210ENST00000377111 KDM5DQ9BY66 1539 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms